chrY : 2,787,314 2,787,567
253 bp 66 TFs 1 linked gene
This 253 bp open chromatin element is linked to SRY and is bound by 66 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SRY 114 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrY:2,782,314 – 2,792,567
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ARID4A 2 datasets
ChIP Hep-G2 ENCSR386UBO.ARID4A.Hep-G2 177 bp overlap
ChIP HepG2 ENCFF142DIE 226 bp overlap
ASH2L 3 datasets
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 253 bp overlap
ChIP HepG2 ENCFF207QHL 62 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 253 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 63 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 253 bp overlap
BRCA1 1 dataset
ChIP WA01 ENCSR000EBX.BRCA1.WA01 132 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 226 bp overlap
BRD4 1 dataset
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 253 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 253 bp overlap
CHD2 4 datasets
ChIP H1 ENCFF991MKH 222 bp overlap
ChIP Hep-G2 ENCSR000EED.CHD2.Hep-G2 224 bp overlap
ChIP HepG2 ENCFF968LAV 232 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 160 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 179 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 253 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 202 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 253 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 253 bp overlap
ELF1 2 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 249 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 138 bp overlap
EZH2 7 datasets
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 253 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 253 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 253 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 253 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 253 bp overlap
ChIP fibroblast of lung ENCFF479BAW 253 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 174 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 149 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF750ZWM 253 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 214 bp overlap
HMGXB4 2 datasets
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 253 bp overlap
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 182 bp overlap
HNRNPLL 1 dataset
ChIP HepG2 ENCFF355PIC 86 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 101 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 253 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 216 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 253 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 136 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 140 bp overlap
MAFK 1 dataset
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 60 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 253 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 241 bp overlap
NAIF1 1 dataset
ChIP HepG2 ENCFF291NIS 253 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 253 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 85 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 253 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 253 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 253 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 253 bp overlap
POLR2A 1 dataset
ChIP HepG2 ENCFF350RIU 94 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 53 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 65 bp overlap
RAD21 2 datasets
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 145 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 64 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 253 bp overlap
REST 1 dataset
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 123 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 88 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 107 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 157 bp overlap
SIN3A 1 dataset
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 109 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 234 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 238 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 205 bp overlap
TAF1 4 datasets
ChIP H1 ENCFF478SZO 154 bp overlap
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 253 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 70 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 135 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 253 bp overlap
ChIP Hep-G2 ENCSR000EEL.TBP.Hep-G2 253 bp overlap
ChIP HepG2 ENCFF023IVD 187 bp overlap
ChIP HepG2 ENCFF023IVD 172 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 167 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 253 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 253 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 74 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 141 bp overlap
YY1 2 datasets
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 180 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 107 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 167 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 50 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 239 bp overlap
ZNF292 1 dataset
ChIP HepG2 ENCFF975MAJ 253 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 133 bp overlap