chrX : 129,188,212 – 129,188,585
373 bp 86 TFs 0 linked genes
This 373 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:129,183,212 – 129,193,585
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
AR 4 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 109 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 86 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 228 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 51 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
Arid3b 2 datasets
Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap
Motif ES_0h ES_0h-Arid3b_MA0601.2 7 bp overlap
Arnt 2 datasets
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
Motif ES_0h ES_0h-Arnt_MA0004.1 6 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
CLOCK 2 datasets
Motif DE_12h DE_12h-CLOCK_MA0819.3 7 bp overlap
Motif ES_0h ES_0h-CLOCK_MA0819.3 7 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
E2F1 2 datasets
Motif DE_12h DE_12h-E2F1_MA0024.3 12 bp overlap
Motif ES_0h ES_0h-E2F1_MA0024.3 12 bp overlap
E2F2 2 datasets
Motif DE_12h DE_12h-E2F2_MA0864.3 13 bp overlap
Motif ES_0h ES_0h-E2F2_MA0864.3 13 bp overlap
E2F4 2 datasets
Motif DE_12h DE_12h-E2F4_MA0470.3 13 bp overlap
Motif ES_0h ES_0h-E2F4_MA0470.3 13 bp overlap
FEZF2 3 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
ChIP prostate_tumor_tissue3 GSE114385.FOXA1.prostate_tumor_tissue3 62 bp overlap
GATA1::TAL1 1 dataset
Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap
Gli1 2 datasets
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap
HES7 2 datasets
Motif DE_12h DE_12h-HES7_MA0822.1 12 bp overlap
Motif ES_0h ES_0h-HES7_MA0822.1 12 bp overlap
HOXC13 1 dataset
Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap
Hnf1A 2 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
IRF7 1 dataset
Motif ES_0h ES_0h-IRF7_MA0772.2 13 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MAX 6 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
Motif ES_0h ES_0h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 321 bp overlap
ChIP H1 ENCFF914VQY 207 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 257 bp overlap
ChIP WTC11 ENCFF223QFY 373 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MNT 2 datasets
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
Motif ES_0h ES_0h-MNT_MA0825.2 6 bp overlap
MTF1 1 dataset
Motif ES_0h ES_0h-MTF1_MA0863.1 14 bp overlap
MXI1 1 dataset
ChIP H1 ENCFF963FZS 316 bp overlap
MYC 5 datasets
Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap
Motif ES_0h ES_0h-MYC_MA0147.4 8 bp overlap
ChIP H1 ENCFF794ZJT 265 bp overlap
ChIP MCF-7 ENCFF394LGD 303 bp overlap
ChIP WA01 ENCSR000EBY.MYC.WA01 135 bp overlap
MYCN 2 datasets
Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap
Motif ES_0h ES_0h-MYCN_MA0104.5 8 bp overlap
MZF1 3 datasets
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
Mafb 2 datasets
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
Mlxip 2 datasets
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
Motif ES_0h ES_0h-Mlxip_MA0622.2 6 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 158 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 120 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 173 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
Motif ES_0h ES_0h-NR2F1_MA1537.2 13 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Npas2 2 datasets
Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap
Motif ES_0h ES_0h-Npas2_MA0626.2 8 bp overlap
Nr2f6 2 datasets
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
Motif ES_0h ES_0h-Nr2f6_MA0677.2 13 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PBX3 1 dataset
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
POU1F1 4 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 4 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 4 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 5 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 4 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 4 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 4 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 4 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 4 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 10 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 353 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 176 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 317 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 373 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 274 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 373 bp overlap
POU5F1B 4 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 350 bp overlap
Pou5f1::Sox2 4 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm14 2 datasets
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
Motif ES_0h ES_0h-Prdm14_MA1998.2 8 bp overlap
Prdm4 2 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
RFX4 2 datasets
Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap
Motif ES_0h ES_0h-RFX4_MA0799.3 13 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 115 bp overlap
Rfx6 2 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 62 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 187 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
STAT1::STAT2 1 dataset
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
Stat4 1 dataset
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Stat5a 1 dataset
Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap
TCF7 2 datasets
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
Motif ES_0h ES_0h-TCF7_MA0769.3 7 bp overlap
TCF7L1 2 datasets
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif ES_0h ES_0h-TCF7L2_MA0523.2 9 bp overlap
TFDP1 2 datasets
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
Motif ES_0h ES_0h-TFDP1_MA1122.2 8 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
THRB 1 dataset
Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 373 bp overlap
YY1 5 datasets
ChIP H1 ENCFF524BTL 268 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 232 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 198 bp overlap
ChIP NT2/D1 ENCFF999MII 325 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 257 bp overlap
Yy1 2 datasets
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZBTB6 1 dataset
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZFP42 6 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZNF184 1 dataset
Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap
ZNF211 1 dataset
Motif ES_0h ES_0h-ZNF211_MA1974.2 10 bp overlap
ZNF384 1 dataset
Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap
ZNF417 2 datasets
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
Motif ES_0h ES_0h-ZNF417_MA1727.2 7 bp overlap
ZNF449 2 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF680 1 dataset
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
ZNF766 1 dataset
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
ZNF816 2 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zfp961 2 datasets
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Motif ES_0h ES_0h-Zfp961_MA2126.1 8 bp overlap
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