chr22 : 48,239,500 48,240,631
1,131 bp 91 TFs 1 linked gene
This 1.1 kb open chromatin element is linked to TAFA5 and is bound by 91 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TAFA5 249.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:48,234,500 – 48,245,631
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
BACH1 2 datasets
ChIP H1 ENCFF282VDB 321 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 135 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 633 bp overlap
BARX2 2 datasets
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 346 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 322 bp overlap
BRD4 8 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 290 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 397 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 468 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 267 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 408 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 353 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 241 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 203 bp overlap
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 520 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 289 bp overlap
ChIP K562 ENCFF673OEZ 168 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 124 bp overlap
CTCF 2 datasets
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP neural progenitor cell ENCFF581WPG 60 bp overlap
CTNNB1 2 datasets
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 289 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 262 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 425 bp overlap
ChIP BLaER1 ENCFF896HSY 251 bp overlap
DUX4 2 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Dux 2 datasets
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 247 bp overlap
ChIP hESC GSE26097.EOMES.hESC 444 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 284 bp overlap
EZH2 10 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 144 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 65 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 535 bp overlap
ChIP T98G GSE112240.EZH2.T98G 201 bp overlap
ChIP T98G GSE112240.EZH2.T98G 122 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 193 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 276 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 325 bp overlap
ChIP neural progenitor cell ENCFF018MKA 332 bp overlap
ChIP neural progenitor cell ENCFF018MKA 819 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 234 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 594 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 200 bp overlap
GATA1 5 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 205 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 220 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 190 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 191 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 195 bp overlap
GATA1::TAL1 2 datasets
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 4 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 193 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 306 bp overlap
GATA3 5 datasets
ChIP BE2C GSE65664.GATA3.BE2C 172 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 299 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 340 bp overlap
ChIP NGP GSE65664.GATA3.NGP 181 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 183 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 1112 bp overlap
ChIP DE DE-GATA4-2 1131 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 605 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 353 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 1130 bp overlap
ChIP DE DE-GATA6-2 1121 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 1090 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1096 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 1131 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1129 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1131 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 1131 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 1083 bp overlap
ChIP foregut GSE117136.GATA6.foregut 604 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 565 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 248 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 125 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 101 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 519 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR000BMG.HDAC2.K-562 159 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 172 bp overlap
Hnf1A 1 dataset
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
IRF2 2 datasets
Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap
Motif DE_72h DE_72h-IRF2_MA0051.2 16 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 449 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 313 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 433 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 591 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 481 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 404 bp overlap
KDM1A 3 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 206 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 175 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 162 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 150 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 175 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_72h DE_72h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_72h DE_72h-MEIS3_MA0775.2 7 bp overlap
MYB 2 datasets
ChIP DU528 GSE94000.MYB.DU528 597 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 216 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 276 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 267 bp overlap
Mecom 2 datasets
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 350 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 249 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 821 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 342 bp overlap
ChIP hESC GSE18292.NANOG.hESC 101 bp overlap
NIPBL 3 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 229 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 455 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 219 bp overlap
NKX6-3 2 datasets
Motif DE_60h DE_60h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_72h DE_72h-NKX6-3_MA1530.2 8 bp overlap
Nr2e1 2 datasets
Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_72h DE_72h-Nr2e1_MA0676.1 9 bp overlap
PBX3 1 dataset
Motif DE_72h DE_72h-PBX3_MA1114.2 11 bp overlap
PHOX2A 2 datasets
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PKNOX1 1 dataset
Motif DE_72h DE_72h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 385 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 940 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 410 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 163 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 225 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 170 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 86 bp overlap
SMAD2 4 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 343 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 155 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 683 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 329 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 1131 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 1131 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 1131 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1131 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1131 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 264 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 190 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 281 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 320 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 442 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 297 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 312 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 290 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 329 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 616 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 356 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 733 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 1023 bp overlap
SOX2 3 datasets
ChIP H9 GSE46837.SOX2.H9 300 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 412 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 302 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 806 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 267 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
T 3 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 260 bp overlap
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 402 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 263 bp overlap
TAL1 12 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 222 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 201 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 193 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 211 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 214 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 178 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 217 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 190 bp overlap
ChIP K562 ENCFF620GMX 147 bp overlap
ChIP K562 ENCFF661CCK 233 bp overlap
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 180 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 195 bp overlap
TBP 1 dataset
ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 219 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 182 bp overlap
ChIP K562 ENCFF931DJY 261 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 180 bp overlap
ChIP K562 ENCFF319QZT 254 bp overlap
TCF7L1 1 dataset
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 445 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 134 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 381 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 99 bp overlap
ZNF382 2 datasets
Motif DE_60h DE_60h-ZNF382_MA1594.1 24 bp overlap
Motif DE_72h DE_72h-ZNF382_MA1594.1 24 bp overlap
ZSCAN4 2 datasets
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_72h DE_72h-ZSCAN4_MA1155.1 15 bp overlap