chr20 : 47,804,262 47,804,649
387 bp 75 TFs 0 linked genes
This 387 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:47,799,262 – 47,809,649
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 70 bp overlap
ChIP H1 ENCFF399KAM 276 bp overlap
Arnt 1 dataset
Motif DE_24h DE_24h-Arnt_MA0004.1 6 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 153 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 141 bp overlap
BRCA2 1 dataset
ChIP MCF-7 ENCFF531NNL 185 bp overlap
CLOCK 1 dataset
Motif DE_24h DE_24h-CLOCK_MA0819.3 7 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP MCF-7 ENCFF570JPP 70 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 276 bp overlap
CTCFL 1 dataset
Motif DE_24h DE_24h-CTCFL_MA1102.3 8 bp overlap
E2F1 1 dataset
Motif DE_24h DE_24h-E2F1_MA0024.3 12 bp overlap
E2F2 1 dataset
Motif DE_24h DE_24h-E2F2_MA0864.3 13 bp overlap
E2F4 3 datasets
Motif DE_24h DE_24h-E2F4_MA0470.3 13 bp overlap
ChIP MCF-7 ENCFF249IZG 230 bp overlap
ChIP MCF-7 ENCFF249IZG 289 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 166 bp overlap
FEZF2 1 dataset
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
Hic1 1 dataset
Motif DE_24h DE_24h-Hic1_MA0739.2 8 bp overlap
Hnf1A 1 dataset
Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap
Isl1 1 dataset
Motif DE_24h DE_24h-Isl1_MA1608.2 7 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 144 bp overlap
Lef1 1 dataset
Motif DE_24h DE_24h-Lef1_MA0768.3 8 bp overlap
MAX 4 datasets
Motif DE_24h DE_24h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF914VQY 216 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 218 bp overlap
ChIP WTC11 ENCFF223QFY 387 bp overlap
MAZ 1 dataset
Motif DE_24h DE_24h-MAZ_MA1522.2 8 bp overlap
MNT 1 dataset
Motif DE_24h DE_24h-MNT_MA0825.2 6 bp overlap
MXI1 1 dataset
ChIP H1 ENCFF963FZS 303 bp overlap
MYC 2 datasets
Motif DE_24h DE_24h-MYC_MA0147.4 8 bp overlap
ChIP H1 ENCFF794ZJT 255 bp overlap
MYCN 1 dataset
Motif DE_24h DE_24h-MYCN_MA0104.5 8 bp overlap
MZF1 1 dataset
Motif DE_24h DE_24h-MZF1_MA0056.3 8 bp overlap
Mlxip 1 dataset
Motif DE_24h DE_24h-Mlxip_MA0622.2 6 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 208 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 122 bp overlap
ChIP H1 ENCFF747ZPQ 192 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 310 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 174 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 194 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 168 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 192 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 141 bp overlap
NFIB 1 dataset
Motif DE_24h DE_24h-NFIB_MA1643.2 17 bp overlap
NFIC 1 dataset
Motif DE_24h DE_24h-NFIC_MA1527.2 15 bp overlap
NR2F1 1 dataset
Motif DE_24h DE_24h-NR2F1_MA1537.2 13 bp overlap
Npas2 1 dataset
Motif DE_24h DE_24h-Npas2_MA0626.2 8 bp overlap
Nr2f6 1 dataset
Motif DE_24h DE_24h-Nr2f6_MA0677.2 13 bp overlap
PKNOX1 2 datasets
ChIP K562 ENCFF236IUS 284 bp overlap
ChIP MCF-7 ENCFF116OCS 275 bp overlap
PLAG1 1 dataset
Motif DE_24h DE_24h-PLAG1_MA0163.1 14 bp overlap
POU1F1 1 dataset
Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_24h DE_24h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_24h DE_24h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_24h DE_24h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_24h DE_24h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_24h DE_24h-POU3F4_MA0789.1 9 bp overlap
POU5F1 12 datasets
ChIP BG03 GSE21614.POU5F1.BG03 143 bp overlap
Motif DE_24h DE_24h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 357 bp overlap
ChIP GM23338 ENCFF333SNB 239 bp overlap
ChIP H1 ENCFF698ZAP 175 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 312 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 302 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 138 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 128 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 232 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 337 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 213 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 384 bp overlap
RBBP5 1 dataset
ChIP H1 ENCFF905HFL 252 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCFF782EZS 308 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 124 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 354 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 255 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 173 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 227 bp overlap
SP1 5 datasets
ChIP H1 ENCFF263FUH 285 bp overlap
ChIP H1 ENCFF263FUH 222 bp overlap
ChIP MCF-7 ENCFF202YLB 89 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 145 bp overlap
ChIP WTC11 ENCFF688PEU 387 bp overlap
TBP 4 datasets
ChIP H1 ENCFF859IIO 227 bp overlap
ChIP hESC GSE122298.TBP.hESC 108 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 105 bp overlap
ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 89 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 145 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 159 bp overlap
TCF7 1 dataset
Motif DE_24h DE_24h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_24h DE_24h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_24h DE_24h-TCF7L2_MA0523.2 9 bp overlap
TSC22D2 1 dataset
ChIP MCF-7 ENCFF588BUN 188 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 143 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 345 bp overlap
VENTX 1 dataset
Motif DE_24h DE_24h-VENTX_MA0724.1 9 bp overlap
YY1 6 datasets
ChIP H1 ENCFF524BTL 204 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 140 bp overlap
ChIP K562 ENCFF660QRE 79 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 188 bp overlap
ChIP NT2/D1 ENCFF999MII 311 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 222 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 190 bp overlap
ZNF148 1 dataset
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF211 1 dataset
Motif DE_24h DE_24h-ZNF211_MA1974.2 10 bp overlap
ZNF227 1 dataset
ChIP MCF-7 ENCFF634YOG 318 bp overlap
ZNF417 1 dataset
Motif DE_24h DE_24h-ZNF417_MA1727.2 7 bp overlap
ZNF8 1 dataset
ChIP MCF-7 ENCFF142XPL 103 bp overlap
ZNF816 1 dataset
Motif DE_24h DE_24h-ZNF816_MA1719.2 15 bp overlap
Zfp961 1 dataset
Motif DE_24h DE_24h-Zfp961_MA2126.1 8 bp overlap