chr20 : 21,106,103 21,106,394
291 bp 71 TFs 2 linked genes
This 291 bp open chromatin element is linked to LINC00237 and RPL24P2 and is bound by 71 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LINC00237 4.8 kb Proximal Proximity
RPL24P2 8.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:21,101,103 – 21,111,394
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 186 bp overlap
ChIP HepG2 ENCFF358CXO 83 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 291 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 291 bp overlap
BRD2 1 dataset
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 104 bp overlap
BRD4 11 datasets
ChIP BE2C GSE80151.BRD4.BE2C 291 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 239 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 141 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 171 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 291 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 193 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 291 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 141 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 291 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 291 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 159 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 212 bp overlap
CHD1 3 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 291 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 181 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 284 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 84 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 240 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 159 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 174 bp overlap
ESR1 2 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 120 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 222 bp overlap
EZH2 33 datasets
ChIP A673 ENCFF790MVL 291 bp overlap
ChIP A673 ENCFF955JRZ 291 bp overlap
ChIP H1 ENCFF232NZA 291 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 291 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 291 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 291 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 291 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 208 bp overlap
ChIP T98G GSE112240.EZH2.T98G 291 bp overlap
ChIP astrocyte ENCFF365JTP 291 bp overlap
ChIP astrocyte ENCFF365JTP 291 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 291 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 224 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 177 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 291 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 111 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 150 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 280 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 55 bp overlap
ChIP fibroblast of lung ENCFF479BAW 100 bp overlap
ChIP fibroblast of lung ENCFF479BAW 291 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 130 bp overlap
ChIP hepatocyte ENCFF118DKH 91 bp overlap
ChIP hepatocyte ENCFF552DZB 291 bp overlap
ChIP keratinocyte ENCFF070STK 291 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 260 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 145 bp overlap
ChIP myotube ENCFF857GWB 90 bp overlap
ChIP myotube ENCFF857GWB 291 bp overlap
ChIP neural cell ENCFF610EPB 128 bp overlap
ChIP neural progenitor cell ENCFF018MKA 291 bp overlap
ChIP neural progenitor cell ENCFF472NFV 291 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 214 bp overlap
FOS 2 datasets
ChIP MCF-7 ENCFF282FWZ 268 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 233 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 291 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 208 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 208 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 291 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 162 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 176 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 176 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 173 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 220 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 291 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 273 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 243 bp overlap
KDM4A 2 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 291 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 165 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 183 bp overlap
KDM5B 2 datasets
ChIP MCF-7 GSE46055.KDM5B.MCF-7 112 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 145 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 177 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 149 bp overlap
MYC 2 datasets
ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 217 bp overlap
ChIP NB69 GSE138295.MYC.NB69 186 bp overlap
MYCN 4 datasets
ChIP BE2C GSE80151.MYCN.BE2C 291 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 94 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 76 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 291 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 291 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 175 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 216 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 194 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 198 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 156 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 54 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 291 bp overlap
ChIP H1 ENCFF427UFV 203 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 101 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 84 bp overlap
POU5F1 4 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 176 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 291 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 173 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 220 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 291 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 291 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 269 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 275 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 248 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 197 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 167 bp overlap
RBM39 1 dataset
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 291 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 107 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 117 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 194 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 248 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 291 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 112 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 172 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 291 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 291 bp overlap
SMARCA4 8 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 192 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 54 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 139 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 207 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 291 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 161 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 57 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 243 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 214 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 230 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 271 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 115 bp overlap
SUZ12 9 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 172 bp overlap
ChIP H1 ENCFF881NFR 291 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 291 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 291 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 194 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 291 bp overlap
ChIP NT2/D1 ENCFF574SXS 291 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 291 bp overlap
ChIP hMSC GSE125166.SUZ12.hMSC 174 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 126 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 183 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 101 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 101 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 167 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 291 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 175 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 169 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 231 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 291 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 291 bp overlap