chr19 : 56,084,930 56,085,327
397 bp 67 TFs 0 linked genes
This 397 bp open chromatin element has no linked target genes and is bound by 67 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:56,079,930 – 56,090,327
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 201 bp overlap
ChIP HepG2 ENCFF773YDL 205 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 97 bp overlap
ATF2 1 dataset
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 214 bp overlap
BCL3 3 datasets
ChIP A-549 ENCSR000BQH.BCL3.A-549 54 bp overlap
ChIP A-549 ENCSR000BQH.BCL3.A-549 253 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 75 bp overlap
BRD2 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 146 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 390 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 151 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 106 bp overlap
CEBPD 1 dataset
ChIP Hep-G2 ENCSR000BQJ.CEBPD.Hep-G2 149 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 208 bp overlap
CRX 1 dataset
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 263 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 76 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 179 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 151 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 367 bp overlap
FOSL2 1 dataset
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 397 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 332 bp overlap
ChIP DE DE-GATA4-2 325 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 367 bp overlap
ChIP DE DE-GATA6-2 330 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 298 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 287 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 367 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 127 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 318 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 397 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 213 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 213 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 397 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 397 bp overlap
JUN 4 datasets
ChIP A549 ENCFF846DUV 304 bp overlap
ChIP A549 ENCFF846DUV 102 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 315 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 210 bp overlap
JUND 1 dataset
ChIP A-549 ENCSR000BRF.JUND.A-549 64 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 224 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 148 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 262 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 89 bp overlap
MYBL2 1 dataset
ChIP MCF-10A_DOX GSE115787.MYBL2.MCF-10A_DOX 169 bp overlap
MYNN 2 datasets
ChIP K-562 ENCSR737LTZ.MYNN.K-562 165 bp overlap
ChIP K-562 ENCSR737LTZ.MYNN.K-562 129 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 122 bp overlap
NEUROD1 4 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 319 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 291 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 156 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 308 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 137 bp overlap
NONO 1 dataset
ChIP HepG2 ENCFF361UQH 320 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 170 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 345 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 114 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 397 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 214 bp overlap
PML 2 datasets
ChIP K-562 ENCSR000BQY.PML.K-562 150 bp overlap
ChIP K-562 ENCSR000BQY.PML.K-562 173 bp overlap
POLR2A 9 datasets
ChIP GM12878 ENCFF412KAE 318 bp overlap
ChIP GM12878 ENCFF521FXC 116 bp overlap
ChIP HeLa-S3 ENCFF224LWS 339 bp overlap
ChIP HeLa-S3 ENCFF224LWS 101 bp overlap
ChIP K562 ENCFF262YXJ 144 bp overlap
ChIP K562 ENCFF262YXJ 330 bp overlap
ChIP Panc1 ENCFF290KAB 71 bp overlap
ChIP spleen ENCFF446ZGT 150 bp overlap
ChIP spleen ENCFF706IUS 165 bp overlap
POLR2G 3 datasets
ChIP K562 ENCFF047BLG 198 bp overlap
ChIP K562 ENCFF648YPL 200 bp overlap
ChIP K562 ENCFF648YPL 200 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 223 bp overlap
RBM22 7 datasets
ChIP HepG2 ENCFF292RVQ 226 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 87 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 72 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 167 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 151 bp overlap
ChIP K562 ENCFF420JDS 175 bp overlap
ChIP K562 ENCFF629OUL 169 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 210 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 169 bp overlap
REST 3 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 156 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 331 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 136 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 340 bp overlap
RUVBL2 1 dataset
ChIP Huh-7 GSE97411.RUVBL2.Huh-7 139 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 321 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 304 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 360 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 151 bp overlap
SUPT5H 1 dataset
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 141 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 208 bp overlap
TP53 15 datasets
ChIP GM00011 GSE55727.TP53.GM00011 84 bp overlap
ChIP GM06170 GSE55727.TP53.GM06170 207 bp overlap
ChIP H9 GSE142050.TP53.H9 200 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 216 bp overlap
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 139 bp overlap
ChIP HCT-116_Nutlin3a GSE125927.TP53.HCT-116_Nutlin3a 199 bp overlap
ChIP HCT-116_nutlin GSE86164.TP53.HCT-116_nutlin 229 bp overlap
ChIP HCT-116_siGLIS2-1-5FU GSE125927.TP53.HCT-116_siGLIS2-1-5FU 198 bp overlap
ChIP MCF-7_1h_IR_10Gy GSE100099.TP53.MCF-7_1h_IR_10Gy 149 bp overlap
ChIP MCF-7_2-5h_IR_10Gy GSE100099.TP53.MCF-7_2-5h_IR_10Gy 86 bp overlap
ChIP MCF-7_7-5h_IR_10Gy_Nutlin GSE100099.TP53.MCF-7_7-5h_IR_10Gy_Nutlin 163 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 196 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 167 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 207 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 224 bp overlap
TP63 7 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 156 bp overlap
ChIP TT GSE46837.TP63.TT 140 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 104 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 91 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 165 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 146 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 136 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 397 bp overlap
ZC3H13 2 datasets
ChIP HepG2 ENCFF444JZJ 292 bp overlap
ChIP HepG2 ENCFF444JZJ 92 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 235 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 201 bp overlap
ZIC5 2 datasets
ChIP HCT-116_WT-CT289 GSE127960.ZIC5.HCT-116_WT-CT289 252 bp overlap
ChIP HCT-116_sc2 GSE127960.ZIC5.HCT-116_sc2 197 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 186 bp overlap