chr19 : 20,285,651 – 20,286,726
1,075 bp 95 TFs 10 linked genes
This 1.1 kb open chromatin element is linked to 10 target genes and is bound by 95 transcription factors.
Linked Genes
10 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000269274 8.4 kb Proximal Proximity
ENSG00000267383 47.7 kb Distal Multiome
ZNF486 118.9 kb Distal Multiome
ENSG00000291130 138.8 kb Distal Multiome
ZNF90 208.1 kb Distal Multiome
ZNF682 246.6 kb Distal Multiome
ZNF737 279.7 kb Distal Multiome
ZNF714 796.1 kb Distal Multiome+HiCAR
ZNF431 855.9 kb Distal Multiome+HiCAR
ZNF43 1565.9 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:20,280,651 – 20,291,726
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
BARX2 1 dataset
Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 259 bp overlap
Crx 3 datasets
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DMRTA2 2 datasets
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
Dmbx1 2 datasets
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
Dmrt1 1 dataset
Motif DE_72h DE_72h-Dmrt1_MA1603.2 9 bp overlap
ERF::FOXI1 2 datasets
Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_72h DE_72h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::SREBF2 2 datasets
Motif DE_60h DE_60h-ERFSREBF2_MA1939.2 16 bp overlap
Motif DE_72h DE_72h-ERFSREBF2_MA1939.2 16 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_72h DE_72h-ETV2FOXI1_MA1942.2 11 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_72h DE_72h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 1075 bp overlap
ChIP DE DE-FOXA2-2 1075 bp overlap
Motif DE_72h DE_72h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_72h DE_72h-FOXA3_MA1683.2 7 bp overlap
FOXE1 2 datasets
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXG1 1 dataset
Motif DE_72h DE_72h-FOXG1_MA0613.1 8 bp overlap
FOXH1 4 datasets
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
FOXI1 1 dataset
Motif DE_72h DE_72h-FOXI1_MA0042.2 7 bp overlap
FOXN3 1 dataset
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_72h DE_72h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXP1 1 dataset
Motif DE_72h DE_72h-FOXP1_MA0481.4 7 bp overlap
FOXP4 1 dataset
Motif DE_72h DE_72h-FOXP4_MA2117.1 7 bp overlap
Foxj3 1 dataset
Motif DE_72h DE_72h-Foxj3_MA0851.2 9 bp overlap
GATA1 3 datasets
Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA1::TAL1 5 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 2 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 1021 bp overlap
ChIP DE DE-GATA4-2 1040 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 330 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 527 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 874 bp overlap
ChIP DE DE-GATA6-2 865 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 859 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 276 bp overlap
ChIP foregut GSE117136.GATA6.foregut 430 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 353 bp overlap
GSC 3 datasets
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 3 datasets
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HNF1A 2 datasets
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
Motif DE_72h DE_72h-HNF1A_MA0046.3 13 bp overlap
HNF1B 2 datasets
Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap
Motif DE_72h DE_72h-HNF1B_MA0153.2 13 bp overlap
Hoxa13 1 dataset
Motif DE_72h DE_72h-Hoxa13_MA0650.4 8 bp overlap
IKZF1 4 datasets
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
IKZF2 4 datasets
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Isl1 1 dataset
Motif DE_72h DE_72h-Isl1_MA1608.2 7 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 281 bp overlap
MXI1 2 datasets
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap
MYB 2 datasets
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap
MYF6 2 datasets
Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap
Motif DE_72h DE_72h-MYF6_MA0667.1 10 bp overlap
MYOD1 2 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
NEUROD1 2 datasets
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_72h DE_72h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 2 datasets
Motif DE_60h DE_60h-NEUROG2_MA0669.1 10 bp overlap
Motif DE_72h DE_72h-NEUROG2_MA0669.1 10 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap
Nr2e1 3 datasets
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_72h DE_72h-Nr2e1_MA0676.1 9 bp overlap
Nr5A2 2 datasets
Motif DE_48h DE_48h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap
OTX1 3 datasets
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PAX3 1 dataset
Motif DE_72h DE_72h-PAX3_MA0780.1 10 bp overlap
PAX6 2 datasets
Motif DE_48h DE_48h-PAX6_MA0069.1 14 bp overlap
Motif DE_72h DE_72h-PAX6_MA0069.1 14 bp overlap
PHOX2A 1 dataset
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PITX1 3 datasets
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 2 datasets
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 3 datasets
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 325 bp overlap
PROP1 1 dataset
Motif DE_72h DE_72h-PROP1_MA0715.1 11 bp overlap
Pax7 1 dataset
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
Ptf1A 2 datasets
Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1618.2 9 bp overlap
RBPJ 2 datasets
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
RHOXF1 3 datasets
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RXRA::VDR 1 dataset
Motif DE_72h DE_72h-RXRAVDR_MA0074.1 15 bp overlap
Rhox11 3 datasets
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap
Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 165 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 505 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 838 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 577 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 282 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 377 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 758 bp overlap
SOX21 2 datasets
Motif DE_48h DE_48h-SOX21_MA0866.1 15 bp overlap
Motif DE_72h DE_72h-SOX21_MA0866.1 15 bp overlap
SPI1 1 dataset
ChIP HL-60 ENCFF645GBT 271 bp overlap
SPIB 4 datasets
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
SPIC 4 datasets
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap
Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap
STAT1::STAT2 2 datasets
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_72h DE_72h-STAT1STAT2_MA0517.2 13 bp overlap
Spi1 4 datasets
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap
Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap
Spz1 2 datasets
Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap
Motif DE_72h DE_72h-Spz1_MA0111.1 11 bp overlap
TEAD1 1 dataset
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
TFAP2A 2 datasets
Motif DE_60h DE_60h-TFAP2A_MA0810.2 11 bp overlap
Motif DE_72h DE_72h-TFAP2A_MA0810.2 11 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZBTB17 1 dataset
Motif DE_72h DE_72h-ZBTB17_MA2102.1 8 bp overlap
ZNF143 2 datasets
Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap
Motif DE_72h DE_72h-ZNF143_MA0088.2 16 bp overlap
ZNF211 1 dataset
Motif DE_72h DE_72h-ZNF211_MA1974.2 10 bp overlap
ZNF281 2 datasets
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF331 1 dataset
Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap
ZNF416 1 dataset
Motif DE_72h DE_72h-ZNF416_MA1979.2 10 bp overlap
ZNF528 2 datasets
Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF549 3 datasets
Motif DE_48h DE_48h-ZNF549_MA1728.2 8 bp overlap
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
Motif DE_72h DE_72h-ZNF549_MA1728.2 8 bp overlap
ZNF76 2 datasets
Motif DE_60h DE_60h-ZNF76_MA1716.2 17 bp overlap
Motif DE_72h DE_72h-ZNF76_MA1716.2 17 bp overlap
ZNF766 1 dataset
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
ZSCAN21 2 datasets
Motif DE_60h DE_60h-ZSCAN21_MA2336.1 7 bp overlap
Motif DE_72h DE_72h-ZSCAN21_MA2336.1 7 bp overlap
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