chr1 : 244,968,324 244,968,761
437 bp 68 TFs 2 linked genes
This 437 bp open chromatin element is linked to EFCAB2 and ENSG00000272195 and is bound by 68 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
EFCAB2 1.6 kb Proximal Proximity
ENSG00000272195 2.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:244,963,324 – 244,973,761
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 57 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 60 bp overlap
BRD2 6 datasets
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 151 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 437 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD2.THP-1_DMSO-PMA 437 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 437 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 437 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 437 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 335 bp overlap
ChIP THP-1_DMSO GSE138084.BRD3.THP-1_DMSO 405 bp overlap
BRD4 12 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 85 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 210 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 190 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 161 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 390 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 333 bp overlap
ChIP OCI-AML3 GSE104745.BRD4.OCI-AML3 61 bp overlap
ChIP THP-1_iBET GSE138084.BRD4.THP-1_iBET 228 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD4.THP-1_iBET-BD1 262 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 165 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 210 bp overlap
CDK8 1 dataset
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 84 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 196 bp overlap
CTCF 1 dataset
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 150 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
ETS1 6 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 180 bp overlap
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 114 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 201 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 180 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 207 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 114 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 54 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT GSE90454.FOXA2.BJ1-hTERT 51 bp overlap
ChIP DE DE-FOXA2-1 227 bp overlap
FOXL2 3 datasets
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 51 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 57 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 91 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 131 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF015GDS 368 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 50 bp overlap
GLI3 1 dataset
Motif DE_24h DE_24h-GLI3_MA1491.3 15 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 389 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 239 bp overlap
ChIP K562 ENCFF928TKZ 398 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 354 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 242 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 188 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 212 bp overlap
ChIP K562 ENCFF771OHZ 146 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 437 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 65 bp overlap
KLF16 1 dataset
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 319 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 203 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 300 bp overlap
ChIP K562 ENCFF398VJM 437 bp overlap
MED1 4 datasets
ChIP AML GSE154985.MED1.AML 351 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 204 bp overlap
ChIP MOLM-14 GSE65138.MED1.MOLM-14 78 bp overlap
ChIP MOLM-14_Veh GSE124963.MED1.MOLM-14_Veh 222 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR107GRP.MLLT1.K-562 256 bp overlap
ChIP K562 ENCFF074XRJ 278 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 304 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 202 bp overlap
Nkx2-1 1 dataset
Motif DE_24h DE_24h-Nkx2-1_MA1994.2 7 bp overlap
POLR2A 6 datasets
ChIP endothelial cell of umbilical vein ENCFF091YHT 203 bp overlap
ChIP sigmoid colon ENCFF725QFT 284 bp overlap
ChIP sigmoid colon ENCFF754JQR 319 bp overlap
ChIP spleen ENCFF044PYR 162 bp overlap
ChIP spleen ENCFF446ZGT 338 bp overlap
ChIP upper lobe of left lung ENCFF504HCM 352 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 293 bp overlap
PPARG 1 dataset
ChIP ASC GSE21366.PPARG.ASC 95 bp overlap
PSIP1 2 datasets
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 158 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 165 bp overlap
RAD21 3 datasets
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 234 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 201 bp overlap
ChIP liver ENCFF522JHE 237 bp overlap
RARA 1 dataset
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
REST 1 dataset
ChIP liver ENCFF240FWT 255 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 236 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 160 bp overlap
ChIP K562 ENCFF506JCB 274 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 129 bp overlap
SP4 1 dataset
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 3 datasets
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 153 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 381 bp overlap
THRA 1 dataset
Motif DE_24h DE_24h-THRA_MA1969.2 18 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 254 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 202 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 51 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 418 bp overlap
ChIP K562 ENCFF875HLX 325 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 408 bp overlap
ZBTB4 1 dataset
ChIP HepG2 ENCFF828GZH 437 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 286 bp overlap
ZNF135 1 dataset
Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 247 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 53 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 241 bp overlap
ZNF263 1 dataset
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
ZNF460 1 dataset
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 396 bp overlap
ZNF610 1 dataset
Motif DE_24h DE_24h-ZNF610_MA1713.2 10 bp overlap