chr14 : 93,669,677 93,670,358
681 bp 147 TFs 2 linked genes
This 681 bp open chromatin element is linked to PRIMA1 and UNC79 and is bound by 147 transcription factors.
Linked Genes
2 genes
Link type
Gene Expression Dist. to TSS Distance Link type
PRIMA1 118.5 kb Distal Multiome+HiCAR
UNC79 239.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:93,664,677 – 93,675,358
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
147 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_72h DE_72h-ALX3_MA0634.2 6 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 347 bp overlap
Arx 1 dataset
Motif DE_72h DE_72h-Arx_MA0874.2 10 bp overlap
Atoh1 1 dataset
Motif DE_72h DE_72h-Atoh1_MA0461.3 8 bp overlap
CTCFL 3 datasets
Motif DE_48h DE_48h-CTCFL_MA1102.3 8 bp overlap
Motif DE_60h DE_60h-CTCFL_MA1102.3 8 bp overlap
Motif DE_72h DE_72h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DRGX 1 dataset
Motif DE_72h DE_72h-DRGX_MA1481.2 6 bp overlap
Dlx2 1 dataset
Motif DE_72h DE_72h-Dlx2_MA0885.3 8 bp overlap
Dlx5 1 dataset
Motif DE_72h DE_72h-Dlx5_MA1476.3 8 bp overlap
Dmbx1 1 dataset
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
EBF3 1 dataset
Motif DE_72h DE_72h-EBF3_MA1637.2 9 bp overlap
EMX1 1 dataset
Motif DE_72h DE_72h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_72h DE_72h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_72h DE_72h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_72h DE_72h-EN2_MA0642.3 7 bp overlap
ERF::FOXO1 2 datasets
Motif DE_60h DE_60h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_72h DE_72h-ERFFOXO1_MA1936.2 12 bp overlap
ESX1 1 dataset
Motif DE_72h DE_72h-ESX1_MA0644.3 7 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_72h DE_72h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXI1 5 datasets
Motif DE_48h DE_48h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_72h DE_72h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_72h DE_72h-ETV5FOXI1_MA1946.2 12 bp overlap
EVX1 1 dataset
Motif DE_72h DE_72h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_72h DE_72h-EVX2_MA0888.2 6 bp overlap
EZH2 2 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 102 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 342 bp overlap
Ebf2 1 dataset
Motif DE_72h DE_72h-Ebf2_MA1604.2 9 bp overlap
Elf5 1 dataset
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF740VZW 285 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 681 bp overlap
ChIP DE DE-FOXA2-2 681 bp overlap
FOXD2 2 datasets
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXD3 3 datasets
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
Motif DE_72h DE_72h-FOXD3_MA0041.3 14 bp overlap
Motif DE_72h DE_72h-FOXD3_MA0041.3 14 bp overlap
FOXE1 2 datasets
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXN3 2 datasets
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
FOXO1::ELF1 2 datasets
Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_72h DE_72h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_60h DE_60h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_72h DE_72h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_60h DE_60h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_72h DE_72h-FOXO1FLI1_MA1956.2 13 bp overlap
Foxj3 2 datasets
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Motif DE_72h DE_72h-Foxj3_MA0851.2 9 bp overlap
Foxq1 2 datasets
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
Motif DE_72h DE_72h-Foxq1_MA0040.2 10 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 681 bp overlap
ChIP DE DE-GATA4-2 681 bp overlap
ChIP foregut GSE117136.GATA4.foregut 459 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 677 bp overlap
ChIP DE DE-GATA6-2 681 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 601 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 563 bp overlap
ChIP foregut GSE117136.GATA6.foregut 439 bp overlap
GBX1 1 dataset
Motif DE_72h DE_72h-GBX1_MA0889.2 7 bp overlap
GFI1 2 datasets
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
GSX1 1 dataset
Motif DE_72h DE_72h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_72h DE_72h-GSX2_MA0893.3 7 bp overlap
Gfi1B 2 datasets
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HOXA1 1 dataset
Motif DE_72h DE_72h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_72h DE_72h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_72h DE_72h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_72h DE_72h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_72h DE_72h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_72h DE_72h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_72h DE_72h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_72h DE_72h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_72h DE_72h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_72h DE_72h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_72h DE_72h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_72h DE_72h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_72h DE_72h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_72h DE_72h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_72h DE_72h-HOXD8_MA0910.3 7 bp overlap
IKZF2 5 datasets
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
Motif DE_72h DE_72h-IRF2_MA0051.2 16 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 85 bp overlap
IRF9 2 datasets
Motif DE_60h DE_60h-IRF9_MA0653.1 15 bp overlap
Motif DE_72h DE_72h-IRF9_MA0653.1 15 bp overlap
ISX 1 dataset
Motif DE_72h DE_72h-ISX_MA0654.2 6 bp overlap
Irf1 5 datasets
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
Motif DE_72h DE_72h-Irf1_MA0050.4 11 bp overlap
Motif DE_72h DE_72h-Irf1_MA0050.4 11 bp overlap
LBX1 1 dataset
Motif DE_72h DE_72h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_72h DE_72h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_72h DE_72h-LHX9_MA0701.3 7 bp overlap
LMX1A 1 dataset
Motif DE_72h DE_72h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_72h DE_72h-LMX1B_MA0703.3 8 bp overlap
Lef1 2 datasets
Motif DE_72h DE_72h-Lef1_MA0768.3 8 bp overlap
Motif DE_72h DE_72h-Lef1_MA0768.3 8 bp overlap
Lhx1 1 dataset
Motif DE_72h DE_72h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif DE_72h DE_72h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_72h DE_72h-Lhx8_MA0705.2 6 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEOX1 1 dataset
Motif DE_72h DE_72h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_72h DE_72h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_72h DE_72h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_72h DE_72h-MNX1_MA0707.3 6 bp overlap
MTF1 2 datasets
Motif DE_60h DE_60h-MTF1_MA0863.1 14 bp overlap
Motif DE_72h DE_72h-MTF1_MA0863.1 14 bp overlap
Mecom 3 datasets
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NFIL3 1 dataset
Motif DE_72h DE_72h-NFIL3_MA0025.3 9 bp overlap
NKX6-2 1 dataset
Motif DE_72h DE_72h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_72h DE_72h-NOTO_MA0710.2 7 bp overlap
ONECUT3 3 datasets
Motif DE_48h DE_48h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_72h DE_72h-ONECUT3_MA0757.2 12 bp overlap
OSR2 1 dataset
Motif DE_72h DE_72h-OSR2_MA1646.2 8 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PAX3 1 dataset
Motif DE_72h DE_72h-PAX3_MA0780.1 10 bp overlap
PAX4 1 dataset
Motif DE_72h DE_72h-PAX4_MA0068.2 8 bp overlap
PDX1 1 dataset
Motif DE_72h DE_72h-PDX1_MA0132.3 6 bp overlap
PHOX2A 1 dataset
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PLAG1 1 dataset
Motif DE_72h DE_72h-PLAG1_MA0163.1 14 bp overlap
POU4F2 1 dataset
Motif DE_72h DE_72h-POU4F2_MA0683.2 15 bp overlap
POU6F1 1 dataset
Motif DE_72h DE_72h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_72h DE_72h-POU6F2_MA0793.2 9 bp overlap
PROP1 1 dataset
Motif DE_72h DE_72h-PROP1_MA0715.1 11 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 394 bp overlap
PRRX1 1 dataset
Motif DE_72h DE_72h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_72h DE_72h-PRRX2_MA0075.4 7 bp overlap
Pax7 1 dataset
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_72h DE_72h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_72h DE_72h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAX2 1 dataset
Motif DE_72h DE_72h-RAX2_MA0717.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
SHOX 1 dataset
Motif DE_72h DE_72h-SHOX_MA0630.2 6 bp overlap
SMAD2 2 datasets
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 658 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 613 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 529 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 126 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 557 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 491 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 255 bp overlap
ChIP HepG2 ENCFF767OCK 449 bp overlap
SP5 1 dataset
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
STAT1::STAT2 2 datasets
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_72h DE_72h-STAT1STAT2_MA0517.2 13 bp overlap
Shox2 1 dataset
Motif DE_72h DE_72h-Shox2_MA0720.2 6 bp overlap
Sox1 1 dataset
Motif DE_72h DE_72h-Sox1_MA0870.1 15 bp overlap
Spi1 3 datasets
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap
Stat2 2 datasets
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
TCF7 3 datasets
Motif DE_72h DE_72h-TCF7_MA0769.3 7 bp overlap
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 168 bp overlap
ChIP HepG2 ENCFF628OFQ 337 bp overlap
TLX2 1 dataset
Motif DE_72h DE_72h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_72h DE_72h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_72h DE_72h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_72h DE_72h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_72h DE_72h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_72h DE_72h-VSX2_MA0726.2 7 bp overlap
ZIM3 3 datasets
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ChIP HEK293 GSE76494.ZIM3.HEK293 221 bp overlap
ZNF24 3 datasets
Motif DE_48h DE_48h-ZNF24_MA1124.1 13 bp overlap
Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
ZNF282 2 datasets
Motif DE_60h DE_60h-ZNF282_MA1154.2 15 bp overlap
Motif DE_72h DE_72h-ZNF282_MA1154.2 15 bp overlap
ZNF331 1 dataset
Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap
ZNF585A 1 dataset
ChIP HEK293T GSE78099.ZNF585A.HEK293T 151 bp overlap
ZNF667 1 dataset
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap
ZNF682 1 dataset
Motif DE_72h DE_72h-ZNF682_MA1599.2 11 bp overlap
ZNF85 2 datasets
Motif DE_72h DE_72h-ZNF85_MA1720.2 12 bp overlap
Motif DE_72h DE_72h-ZNF85_MA1720.2 12 bp overlap
ZSCAN4 1 dataset
Motif DE_72h DE_72h-ZSCAN4_MA1155.1 15 bp overlap