chr13 : 104,181,629 104,182,227
598 bp 61 TFs 0 linked genes
This 598 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:104,176,629 – 104,187,227
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 331 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 372 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 274 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 562 bp overlap
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BCL11A 2 datasets
Motif ES_0h ES_0h-BCL11A_MA2324.1 7 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 192 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 176 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 211 bp overlap
EP300 5 datasets
ChIP H1 ENCFF927IYK 135 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 219 bp overlap
ChIP hESC GSE17917.EP300.hESC 126 bp overlap
ChIP hESC GSE17917.EP300.hESC 282 bp overlap
Ebf2 1 dataset
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 57 bp overlap
HNF4A 1 dataset
Motif ES_0h ES_0h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif ES_0h ES_0h-HNF4G_MA0484.3 9 bp overlap
HOXB13 1 dataset
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
JUN 6 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 283 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 281 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 530 bp overlap
ChIP H1 ENCFF621PNP 131 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 516 bp overlap
ChIP WA01 ENCSR000ECA.JUN.WA01 114 bp overlap
JUND 2 datasets
ChIP WA01 ENCSR000EBZ.JUND.WA01 122 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 132 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 283 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MYB 2 datasets
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 598 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 588 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 319 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 598 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 598 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 342 bp overlap
ChIP hESC GSE18292.NANOG.hESC 138 bp overlap
NFE2 1 dataset
Motif ES_0h ES_0h-NFE2_MA0841.2 10 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 160 bp overlap
NKX6-3 1 dataset
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
Nfe2l2 1 dataset
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 598 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 108 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 598 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 238 bp overlap
POU6F1 1 dataset
Motif ES_0h ES_0h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap
RARA 1 dataset
Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 521 bp overlap
ChIP H1 ENCFF905HFL 543 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 156 bp overlap
Rarb 1 dataset
Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap
SMARCA4 3 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 220 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 212 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 598 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 219 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 171 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 142 bp overlap
SMARCC1 3 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 108 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 298 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 225 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 99 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 332 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 574 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SRF 2 datasets
ChIP H1 ENCFF036PEF 225 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 261 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 241 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 161 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 264 bp overlap
TEAD1 1 dataset
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
TEAD4 3 datasets
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 588 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 241 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 302 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 265 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 76 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 424 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 262 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 163 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 301 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 598 bp overlap
ZNF684 1 dataset
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap