chr13 : 96,295,337 – 96,295,565
228 bp 83 TFs 0 linked genes
This 228 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:96,290,337 – 96,300,565
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 228 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 228 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 228 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 146 bp overlap
ATF4 1 dataset
Motif ES_0h ES_0h-ATF4_MA0833.3 10 bp overlap
Ascl2 1 dataset
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 141 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 173 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 216 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 178 bp overlap
CEBPG 1 dataset
Motif ES_0h ES_0h-CEBPG_MA1636.2 10 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 223 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 211 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 220 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 132 bp overlap
DUX4 1 dataset
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
Ddit3::Cebpa 1 dataset
Motif ES_0h ES_0h-Ddit3Cebpa_MA0019.2 10 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 228 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 228 bp overlap
ChIP hESC GSE17917.EP300.hESC 228 bp overlap
ETV2::FOXI1 1 dataset
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
FOXB1 1 dataset
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXD2 2 datasets
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap
FOXJ2::ELF1 1 dataset
Motif ES_0h ES_0h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXO1::ELK3 1 dataset
Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 188 bp overlap
Foxl2 2 datasets
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
HAND2 2 datasets
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 80 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 145 bp overlap
HLF 1 dataset
Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap
Irf1 2 datasets
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 228 bp overlap
KLF4 2 datasets
ChIP HAP1 GSE130417.KLF4.HAP1 117 bp overlap
ChIP WA09 GSE105028.KLF4.WA09 220 bp overlap
LIN54 1 dataset
Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 124 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 228 bp overlap
MEF2A 1 dataset
Motif ES_0h ES_0h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif ES_0h ES_0h-MEF2C_MA0497.2 11 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 228 bp overlap
MYB 2 datasets
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYF6 1 dataset
Motif ES_0h ES_0h-MYF6_MA0667.1 10 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 228 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 228 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 228 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 228 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 193 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 228 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 228 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 228 bp overlap
ChIP hESC GSE18292.NANOG.hESC 217 bp overlap
ChIP hESC GSE20650.NANOG.hESC 167 bp overlap
NEUROD1 1 dataset
Motif ES_0h ES_0h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
Motif ES_0h ES_0h-NEUROG2_MA1642.2 7 bp overlap
NFIL3 1 dataset
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
NIPBL 1 dataset
ChIP WA09 GSE105028.NIPBL.WA09 228 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 136 bp overlap
Neurod2 1 dataset
Motif ES_0h ES_0h-Neurod2_MA0668.3 8 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 228 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 222 bp overlap
POLR2A 4 datasets
ChIP H1 ENCFF566JSR 228 bp overlap
ChIP H1 ENCFF566JSR 143 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 111 bp overlap
ChIP sigmoid colon ENCFF748YVT 66 bp overlap
POU2F1::SOX2 2 datasets
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU5F1 9 datasets
ChIP GM23338 ENCFF333SNB 228 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 228 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 228 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 228 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 208 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 228 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 228 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 152 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 228 bp overlap
Pou5f1::Sox2 2 datasets
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 196 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 228 bp overlap
RFX1 1 dataset
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
RFX2 1 dataset
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
RFX3 1 dataset
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
RFX5 1 dataset
Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 191 bp overlap
SMARCA4 4 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 221 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 228 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 228 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 228 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 205 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 228 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 215 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 228 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 228 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 188 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 228 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 228 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 228 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 190 bp overlap
Stat2 2 datasets
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 80 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 228 bp overlap
TAL1::TCF3 1 dataset
Motif ES_0h ES_0h-TAL1TCF3_MA0091.2 10 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 204 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 149 bp overlap
ChIP hESC GSE122298.TBP.hESC 157 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 144 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 130 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 194 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 228 bp overlap
TCF3 2 datasets
ChIP NPC GSE154479.TCF3.NPC 228 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 187 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 228 bp overlap
TWIST1 1 dataset
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
Tcf21 1 dataset
Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 168 bp overlap
ZBTB18 1 dataset
Motif ES_0h ES_0h-ZBTB18_MA0698.2 11 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZIM3 4 datasets
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ChIP HEK293 GSE76494.ZIM3.HEK293 182 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 195 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 228 bp overlap
ZNF224 1 dataset
ChIP HEK293T GSE78099.ZNF224.HEK293T 160 bp overlap
ZNF343 1 dataset
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZSCAN16 1 dataset
Motif ES_0h ES_0h-ZSCAN16_MA2100.1 18 bp overlap
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