chr1 : 220,544,749 – 220,545,332
583 bp 71 TFs 0 linked genes
This 583 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:220,539,749 – 220,550,332
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 188 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 552 bp overlap
ChIP H1 ENCFF399KAM 352 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 275 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 161 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 90 bp overlap
BRD2 2 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 255 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 293 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 155 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 149 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 239 bp overlap
CTCF 464 datasets
ChIP 22Rv1 ENCFF466OXN 290 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 355 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 374 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 318 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 183 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 295 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 252 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 231 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 214 bp overlap
ChIP A-549 ENCSR000BHW.CTCF.A-549 148 bp overlap
ChIP A-549 ENCSR000BHV.CTCF.A-549 134 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 440 bp overlap
ChIP A549 ENCFF034FVO 244 bp overlap
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP A673 ENCFF123WOM 149 bp overlap
ChIP AG04449 ENCFF248MBD 175 bp overlap
ChIP AG04450 ENCFF116DJL 267 bp overlap
ChIP AG09309 ENCFF478XPS 209 bp overlap
ChIP AG10803 ENCFF549AQK 213 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 334 bp overlap
ChIP BE2C ENCFF757SRF 250 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 189 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 401 bp overlap
ChIP C4-2B ENCFF821XVN 354 bp overlap
ChIP Caco-2 ENCFF934QYS 200 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 138 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 205 bp overlap
ChIP D721Med ENCFF513FYD 211 bp overlap
ChIP DND-41 ENCFF913MRA 256 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 216 bp overlap
ChIP DOHH2 ENCFF637WNW 363 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 535 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 145 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 220 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 228 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 256 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 213 bp overlap
ChIP GM06990 ENCFF471OQT 202 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 197 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 282 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 208 bp overlap
ChIP GM10266 ENCFF241YYF 177 bp overlap
ChIP GM12864 ENCFF357DQE 233 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 197 bp overlap
ChIP GM12865 ENCFF067GFI 239 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 107 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 136 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 149 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 213 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 174 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 186 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 182 bp overlap
ChIP GM12872 ENCFF697BYI 265 bp overlap
ChIP GM12873 ENCFF711LOS 207 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 203 bp overlap
ChIP GM12874 ENCFF942MTD 230 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 187 bp overlap
ChIP GM12878 ENCFF485TGR 229 bp overlap
ChIP GM12878 ENCFF511URZ 195 bp overlap
ChIP GM12878 ENCFF635MMB 207 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 344 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 114 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 172 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 137 bp overlap
ChIP GM13976 ENCFF896BYT 161 bp overlap
ChIP GM13977 ENCFF528ESQ 165 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 101 bp overlap
ChIP GM20000 ENCFF217HWJ 165 bp overlap
ChIP GM23338 ENCFF531QOI 330 bp overlap
ChIP GM23338 ENCFF772DML 175 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 489 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 315 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 330 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 124 bp overlap
ChIP H54 ENCFF255TVO 103 bp overlap
ChIP H9 ENCFF152GTF 275 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 265 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 220 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 173 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 288 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 227 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 247 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 240 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 210 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 278 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 229 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 386 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 344 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 234 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 174 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 298 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 195 bp overlap
ChIP HCT116 ENCFF003KHP 327 bp overlap
ChIP HCT116 ENCFF209YMI 240 bp overlap
ChIP HCT116 ENCFF373YMA 310 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 211 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 70 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 108 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 247 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 156 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 168 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 169 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 249 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 69 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 97 bp overlap
ChIP HEK293 ENCFF498RMM 234 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 217 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 202 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 228 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 252 bp overlap
ChIP HFF-Myc ENCFF680WYR 298 bp overlap
ChIP HFFc6 ENCFF005CJI 355 bp overlap
ChIP HL-60 ERP008568.CTCF.HL-60 280 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 207 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 122 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 124 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 199 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 80 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 239 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 257 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 257 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 243 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 472 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 262 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 300 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 320 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 224 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 414 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 204 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 152 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 332 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 287 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 295 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 212 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 253 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 273 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 259 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 226 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 220 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 198 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 148 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF127KUP 214 bp overlap
ChIP HepG2 ENCFF194VBQ 247 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 258 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 317 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 322 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 142 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 241 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 189 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 449 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 223 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 211 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 191 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 181 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 142 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 170 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 162 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 107 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 142 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 173 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 149 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 139 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 111 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 116 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 110 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 230 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 110 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 119 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 329 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 197 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 228 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 315 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 85 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 157 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 293 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 277 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 318 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 240 bp overlap
ChIP K562 ENCFF400DFR 212 bp overlap
ChIP K562 ENCFF430KTH 338 bp overlap
ChIP K562 ENCFF598YSU 267 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 400 bp overlap
ChIP KB_5Z GSE134435.CTCF.KB_5Z 146 bp overlap
ChIP KB_IL-1_5Z GSE134435.CTCF.KB_IL-1_5Z 133 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 106 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 213 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 167 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 214 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 159 bp overlap
ChIP LNCAP ENCFF223HIG 375 bp overlap
ChIP LNCAP ENCFF700QXT 373 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 326 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 191 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 171 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 399 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 245 bp overlap
ChIP Loucy ENCFF359TVQ 128 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 372 bp overlap
ChIP MCF 10A ENCFF988BGF 296 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 304 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 156 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 292 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 231 bp overlap
ChIP MCF-7 ENCFF139NQI 70 bp overlap
ChIP MCF-7 ENCFF162GNE 233 bp overlap
ChIP MCF-7 ENCFF198DQX 161 bp overlap
ChIP MCF-7 ENCFF210JUZ 238 bp overlap
ChIP MCF-7 ENCFF414SZG 123 bp overlap
ChIP MCF-7 ENCFF424NQR 91 bp overlap
ChIP MCF-7 ENCFF494VXA 161 bp overlap
ChIP MCF-7 ENCFF844STM 82 bp overlap
ChIP MCF-7 ENCFF954TUV 52 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 455 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 279 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 255 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 230 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 220 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 193 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 159 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 183 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 262 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 375 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 343 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 272 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 375 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 285 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 230 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 155 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 254 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 236 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 226 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 138 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 329 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 256 bp overlap
ChIP MM.1S ENCFF869JMQ 312 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 309 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 198 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 171 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 299 bp overlap
ChIP NCI-H929 ENCFF305JAB 382 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 527 bp overlap
ChIP OCI-LY1 ENCFF455ESK 345 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 270 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 378 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 461 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 412 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 309 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 279 bp overlap
ChIP PC-3 ENCFF487TUI 254 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 410 bp overlap
ChIP Panc1 ENCFF056JQX 321 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 220 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 210 bp overlap
ChIP RWPE2 ENCFF911IEE 497 bp overlap
ChIP RWPE2 ENCFF911IEE 288 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 167 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 194 bp overlap
ChIP SK-N-SH ENCFF731NJX 229 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 246 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 248 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 179 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 158 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 183 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 286 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 394 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 266 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 119 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 138 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 498 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 192 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 172 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 295 bp overlap
ChIP T-47D_NaCl-30min GSE111923.CTCF.T-47D_NaCl-30min 221 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 307 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 349 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 353 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 338 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 243 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 388 bp overlap
ChIP THP-1_PMA_Dex-0h GSE103477.CTCF.THP-1_PMA_Dex-0h 318 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 256 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 364 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 308 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 267 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 399 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 354 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 351 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 295 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 288 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 248 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 329 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 366 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 358 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 248 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 295 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 223 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 300 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 295 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 268 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 337 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 227 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 265 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 232 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 262 bp overlap
ChIP UPCI-SCC-090 GSE143026.CTCF.UPCI-SCC-090 122 bp overlap
ChIP VCaP ENCFF858YQT 312 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 399 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 223 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 201 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 175 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 173 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 244 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 184 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 93 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 232 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 222 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 175 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 285 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 230 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 189 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 283 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 236 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 160 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 217 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 270 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 261 bp overlap
ChIP chondrocyte ENCFF134ORZ 221 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 247 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 137 bp overlap
ChIP colon_transverse ENCSR608WPS.CTCF.colon_transverse 205 bp overlap
ChIP endodermal cell ENCFF471YCZ 259 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 193 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 225 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 355 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 197 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 188 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 188 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 271 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 312 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 90 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 158 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 190 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 212 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 177 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 224 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 248 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 203 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 165 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 298 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 236 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 299 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 213 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 231 bp overlap
ChIP fibroblast of lung ENCFF084DUH 174 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 225 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 219 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 241 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 198 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 252 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 115 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 184 bp overlap
ChIP fibroblast_DERMAL ENCSR000APM.CTCF.fibroblast_DERMAL 133 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 218 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 176 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 161 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 182 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 181 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 150 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 141 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 262 bp overlap
ChIP fibroblast_SKIN_ABDOMEN ENCSR000DPV.CTCF.fibroblast_SKIN_ABDOMEN 152 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 111 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 197 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 232 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 269 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 194 bp overlap
ChIP hESC GSE20650.CTCF.hESC 132 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 200 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 170 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 269 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 279 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 277 bp overlap
ChIP hepatocyte ENCFF263BLJ 292 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 218 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 210 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 148 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 201 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 172 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 171 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 175 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 199 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 189 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 208 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 144 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 202 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 154 bp overlap
ChIP islet ERP004003.CTCF.islet 197 bp overlap
ChIP keratinocyte ENCFF046PBT 127 bp overlap
ChIP keratinocyte ENCFF291YDC 127 bp overlap
ChIP keratinocyte ENCFF667ULX 256 bp overlap
ChIP keratinocyte ENCFF805QIE 302 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 583 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 341 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 261 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 204 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 216 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 341 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 263 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 239 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 320 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 185 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 263 bp overlap
ChIP lung_left_upper-lobe ENCSR964BKO.CTCF.lung_left_upper-lobe 286 bp overlap
ChIP lung_left_upper-lobe ENCSR799TJD.CTCF.lung_left_upper-lobe 254 bp overlap
ChIP lung_left_upper-lobe ENCSR972LYL.CTCF.lung_left_upper-lobe 244 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 244 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 243 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 151 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 184 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 202 bp overlap
ChIP neural crest cell ENCFF182LWK 331 bp overlap
ChIP neural progenitor cell ENCFF420RBO 151 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 301 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 193 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 241 bp overlap
ChIP osteocyte ENCFF929FPD 349 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 176 bp overlap
ChIP placenta ENCFF029PHY 337 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 244 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 232 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 243 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 166 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 242 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 330 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 483 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 256 bp overlap
ChIP right lobe of liver ENCFF011NDG 202 bp overlap
ChIP right lobe of liver ENCFF250KSY 311 bp overlap
ChIP right lobe of liver ENCFF523SCB 283 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 281 bp overlap
ChIP skin ENCSR485VQV.CTCF.skin 208 bp overlap
ChIP smooth muscle cell ENCFF656FBT 308 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 177 bp overlap
ChIP stomach ENCFF370OWL 314 bp overlap
ChIP thyroid gland ENCFF300RYK 323 bp overlap
ChIP thyroid gland ENCFF631QRY 329 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 347 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 327 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 267 bp overlap
ChIP upper lobe of left lung ENCFF108BCY 307 bp overlap
ChIP upper lobe of left lung ENCFF374MAK 366 bp overlap
ChIP upper lobe of left lung ENCFF962AIJ 326 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 333 bp overlap
CTCFL 4 datasets
ChIP K-562 ENCSR000BNK.CTCFL.K-562 96 bp overlap
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 185 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 190 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 198 bp overlap
ELL2 1 dataset
ChIP HeLa GSE40632.ELL2.HeLa 216 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 286 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 275 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 291 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 204 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 306 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 268 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 219 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 260 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 268 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 259 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 64 bp overlap
FOXA1 1 dataset
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 338 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
GATA2 2 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 197 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 141 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 273 bp overlap
ChIP DE DE-GATA4-2 415 bp overlap
ChIP foregut GSE117136.GATA4.foregut 309 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 468 bp overlap
GATA6 10 datasets
ChIP AGS GSE51705.GATA6.AGS 226 bp overlap
ChIP DE DE-GATA6-1 353 bp overlap
ChIP DE DE-GATA6-2 449 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 520 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 486 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 400 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 583 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 534 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 437 bp overlap
ChIP foregut GSE117136.GATA6.foregut 339 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 228 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HNF4A 1 dataset
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 447 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 332 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 453 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 164 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 312 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 168 bp overlap
NKX2-1 2 datasets
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 418 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 558 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 206 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 168 bp overlap
RAD21 71 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 163 bp overlap
ChIP A549 ENCFF047SFC 208 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 171 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 340 bp overlap
ChIP H1 ENCFF698EWO 103 bp overlap
ChIP H1 ENCFF967OJF 216 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 164 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 301 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 214 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 192 bp overlap
ChIP HCT116 ENCFF568PEO 245 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 166 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 348 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 185 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 192 bp overlap
ChIP HeLa-S3 ENCFF775CHI 210 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 227 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 213 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 173 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 184 bp overlap
ChIP HepG2 ENCFF963UBJ 213 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 125 bp overlap
ChIP Ishikawa ENCFF570JVV 212 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 132 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 154 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 170 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 220 bp overlap
ChIP MCF-7 ENCFF694KOM 239 bp overlap
ChIP MCF-7 ENCFF724VCQ 221 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 255 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 269 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 244 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 176 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 160 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 196 bp overlap
ChIP MDM GSE103477.RAD21.MDM 168 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 133 bp overlap
ChIP T-47D GSE111923.RAD21.T-47D 239 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.RAD21.T-47D_NaCl-isotonic-triptolide 276 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 297 bp overlap
ChIP THP-1 GSE55407.RAD21.THP-1 146 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.RAD21.THP-1_PMA_Dex-6h 215 bp overlap
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 162 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 223 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 199 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 267 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 265 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 194 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 184 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 187 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 220 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 214 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 237 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.RAD21.THP-1_Pam3csk-180m-Flavo-060m 201 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 216 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 227 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.RAD21.THP-1_siCtrl-NS1-Pam3csk-0h 158 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.RAD21.THP-1_siCtrl-eGFP-Pam3csk-4h 207 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.RAD21.THP-1_siNIPBL-eGFP-Pam3csk-4h 160 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 193 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 210 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 143 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 176 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 169 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 160 bp overlap
ChIP liver ENCFF485PAC 313 bp overlap
ChIP liver ENCFF522JHE 294 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 258 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 111 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 514 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 410 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 275 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE36578.SMAD3.BG03 185 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 179 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 418 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 260 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 163 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 158 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 181 bp overlap
SMC1 3 datasets
ChIP HCAEC GSE101921.SMC1.HCAEC 344 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 258 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 229 bp overlap
SMC1A 6 datasets
ChIP A-549 GSE76893.SMC1A.A-549 158 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 164 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 170 bp overlap
ChIP MCF-7 GSE115602.SMC1A.MCF-7 174 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 211 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 237 bp overlap
SMC3 8 datasets
ChIP GP5D GSE51234.SMC3.GP5D 357 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 277 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 277 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 277 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 313 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 248 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 213 bp overlap
ChIP Hep-G2 ENCSR000EDW.SMC3.Hep-G2 126 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 53 bp overlap
STAG1 9 datasets
ChIP CHRF28811 ERP008568.STAG1.CHRF28811 190 bp overlap
ChIP HCAEC GSE101921.STAG1.HCAEC 138 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 216 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 216 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 194 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 185 bp overlap
ChIP HepG2 ENCFF843EBZ 268 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 222 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 184 bp overlap
STAG2 5 datasets
ChIP HCAEC GSE101921.STAG2.HCAEC 140 bp overlap
ChIP HL-60 GSE131577.STAG2.HL-60 91 bp overlap
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 162 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 145 bp overlap
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 164 bp overlap
STAT3 1 dataset
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 220 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 163 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
TP53 2 datasets
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 165 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 117 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 95 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 121 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 102 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 211 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 70 bp overlap
ZNF143 3 datasets
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 152 bp overlap
ChIP K-562 GSE39263.ZNF143.K-562 256 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 115 bp overlap
ZNF18 4 datasets
ChIP HEK293 ENCFF066NGR 363 bp overlap
ChIP HEK293 ENCFF066NGR 162 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 351 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 189 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 160 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 159 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 62 bp overlap
ZNF384 1 dataset
ChIP HEK293T ENCFF019DZX 140 bp overlap
ZNF444 1 dataset
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 259 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 220 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 230 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 146 bp overlap
Huangfu Lab · Publications · Resources · Contact