chr12 : 115,174,961 115,175,226
265 bp 66 TFs 0 linked genes
This 265 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:115,169,961 – 115,180,226
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 241 bp overlap
ARNTL 1 dataset
ChIP SK-N-SH ENCFF836WHR 69 bp overlap
ATRX 3 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 265 bp overlap
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 265 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 265 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 265 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 230 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 134 bp overlap
BRD4 5 datasets
ChIP BE2C GSE80151.BRD4.BE2C 265 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 265 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 265 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 265 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 265 bp overlap
CDK9 1 dataset
ChIP Kelly_CYC065 GSE107126.CDK9.Kelly_CYC065 116 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 171 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 93 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 265 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 210 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 265 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 231 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 134 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF829RWA 221 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 265 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 145 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 251 bp overlap
ESRRG 2 datasets
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 238 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 265 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 265 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 186 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 239 bp overlap
GATA2 6 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 175 bp overlap
ChIP SH-SY5Y ENCFF485YIB 195 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 263 bp overlap
ChIP SK-N-SH ENCFF764OZD 165 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 235 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 265 bp overlap
GATA3 4 datasets
ChIP BE2C GSE65664.GATA3.BE2C 189 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 233 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 252 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 174 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 250 bp overlap
ChIP DE DE-GATA4-2 205 bp overlap
ChIP G296S GSE85628.GATA4.G296S 223 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 223 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 242 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 259 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 265 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 229 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 223 bp overlap
ChIP DE DE-GATA6-2 265 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 253 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 265 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 265 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 248 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 265 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 193 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 265 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 265 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 265 bp overlap
HEY2 1 dataset
ChIP hiPSC GSE81585.HEY2.hiPSC 248 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 265 bp overlap
ChIP SK-N-SH ENCFF285GEQ 265 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 255 bp overlap
KDM1A 3 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 252 bp overlap
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 77 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 265 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 265 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 248 bp overlap
MXI1 3 datasets
ChIP SK-N-SH ENCFF746HVJ 265 bp overlap
ChIP SK-N-SH ENCFF746HVJ 174 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 243 bp overlap
MYC 2 datasets
ChIP NB69 GSE138295.MYC.NB69 265 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 224 bp overlap
MYCN 12 datasets
ChIP BE2C GSE80151.MYCN.BE2C 265 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 265 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 265 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 214 bp overlap
ChIP Kelly GSE80151.MYCN.Kelly 129 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 265 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 265 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 265 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 235 bp overlap
ChIP NGP GSE80151.MYCN.NGP 107 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 265 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 265 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 265 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 265 bp overlap
NR2F2 1 dataset
ChIP hiPSC GSE81585.NR2F2.hiPSC 255 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 219 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 215 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 265 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 265 bp overlap
POLR2A 8 datasets
ChIP SK-N-SH ENCFF683PFH 265 bp overlap
ChIP sigmoid colon ENCFF101ILL 237 bp overlap
ChIP sigmoid colon ENCFF725QFT 229 bp overlap
ChIP sigmoid colon ENCFF748YVT 222 bp overlap
ChIP sigmoid colon ENCFF754JQR 158 bp overlap
ChIP stomach ENCFF820WZN 258 bp overlap
ChIP transverse colon ENCFF607LKE 121 bp overlap
ChIP transverse colon ENCFF840PXT 230 bp overlap
RAD21 4 datasets
ChIP SK-N-SH ENCFF747MAS 198 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 265 bp overlap
ChIP SK-N-SH GSE76815.RAD21.SK-N-SH 137 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 207 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 113 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 265 bp overlap
REST 4 datasets
ChIP SK-N-SH ENCFF861MKH 170 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 170 bp overlap
ChIP neural ENCSR000BTV.REST.neural 143 bp overlap
ChIP neural cell ENCFF882LXX 208 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 265 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 265 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 265 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 265 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 265 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 265 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 265 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 265 bp overlap
SMARCA4 3 datasets
ChIP NGP GSE134626.SMARCA4.NGP 247 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 256 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 265 bp overlap
SMC3 2 datasets
ChIP SK-N-SH ENCFF791WFB 237 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 180 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH ENCFF449PID 201 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 265 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 259 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 265 bp overlap
SOX2 1 dataset
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 102 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 85 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 100 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 265 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 265 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 265 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 265 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 265 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 265 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 265 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 265 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 182 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 265 bp overlap
ChIP SK-N-SH ENCFF270OWF 255 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 265 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 265 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 159 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 265 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 265 bp overlap
TOX2 2 datasets
ChIP SK-N-SH ENCFF415OYE 223 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 191 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 145 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 265 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 262 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 262 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 265 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 126 bp overlap