chr12 : 110,288,867 – 110,289,237
370 bp 72 TFs 2 linked genes
This 370 bp open chromatin element is linked to ATP2A2 and ENSG00000289311 and is bound by 72 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ATP2A2 7.6 kb Proximal Proximity
ENSG00000289311 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:110,283,867 – 110,294,237
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP GSE43720.AR.LNCaP 136 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 223 bp overlap
ChIP VCaP GSE148358.AR.VCaP 99 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 232 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 180 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 210 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRC.CREB1.A-549 115 bp overlap
DPF2 1 dataset
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 152 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 149 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 164 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 50 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 90 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 262 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 156 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 140 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 155 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 133 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 284 bp overlap
ChIP DE DE-FOXA2-2 274 bp overlap
GABPA 2 datasets
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 132 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 50 bp overlap
GATA2 3 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 82 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 134 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 346 bp overlap
ChIP DE DE-GATA4-2 370 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 132 bp overlap
ChIP foregut GSE117136.GATA4.foregut 212 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 190 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 268 bp overlap
ChIP DE DE-GATA6-2 329 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 235 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 317 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 222 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 338 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 361 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 243 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 370 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 317 bp overlap
ChIP foregut GSE117136.GATA6.foregut 215 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 260 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 105 bp overlap
GLYR1 1 dataset
ChIP HeLa GSE20303.GLYR1.HeLa 370 bp overlap
GRHL2 2 datasets
ChIP HBE GSE46194.GRHL2.HBE 153 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 159 bp overlap
HIF1A 1 dataset
ChIP NCI-H1299 GSE76770.HIF1A.NCI-H1299 144 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 242 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 336 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 370 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 95 bp overlap
JUN 2 datasets
ChIP A549 ENCFF191QZG 172 bp overlap
ChIP A549 ENCFF846DUV 199 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 118 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 194 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 127 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 238 bp overlap
NANOG 2 datasets
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 140 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 309 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 283 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 117 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 113 bp overlap
NR2C1 1 dataset
ChIP K-562 ENCSR178DEG.NR2C1.K-562 123 bp overlap
NR2F1 3 datasets
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 183 bp overlap
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 359 bp overlap
ChIP K562 ENCFF221HJH 168 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 114 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 80 bp overlap
NR2F6 3 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 87 bp overlap
ChIP K-562 ENCSR707QWA.NR2F6.K-562 370 bp overlap
ChIP K562 ENCFF674RQA 267 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BHG.NR3C1.A-549 167 bp overlap
ChIP HeLa-B2_TA_TNFA GSE24518.NR3C1.HeLa-B2_TA_TNFA 78 bp overlap
NR4A1 2 datasets
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 145 bp overlap
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 93 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 142 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 157 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 274 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 101 bp overlap
POLR2A 2 datasets
ChIP A549 ENCFF034EBG 370 bp overlap
ChIP GM12892 ENCFF542ZFO 362 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 171 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 144 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 209 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 62 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 193 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 182 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 116 bp overlap
RELA 1 dataset
ChIP HeLa-B2_TA_TNFA GSE24518.RELA.HeLa-B2_TA_TNFA 129 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 124 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 78 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 130 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 330 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 206 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 80 bp overlap
SMARCC1 1 dataset
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 291 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 247 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 282 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 317 bp overlap
STAT1_pS727 2 datasets
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 204 bp overlap
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 78 bp overlap
SUPT16H 1 dataset
ChIP hiF-T GSE98758.SUPT16H.hiF-T 136 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 251 bp overlap
SUZ12 1 dataset
ChIP ProEs GSE59087.SUZ12.ProEs 158 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 187 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 209 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 138 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 317 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 223 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 168 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 195 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 278 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 165 bp overlap
ZNF317 2 datasets
ChIP HEK293 GSE76494.ZNF317.HEK293 206 bp overlap
ChIP HEK293 GSE76494.ZNF317.HEK293 114 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 370 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 146 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 213 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 131 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 219 bp overlap
ZNF843 1 dataset
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 160 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 202 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 95 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 161 bp overlap
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