chr12 : 98,296,558 98,296,969
411 bp 69 TFs 1 linked gene
This 411 bp open chromatin element is linked to ENSG00000258312 and is bound by 69 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000258312 4.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:98,291,558 – 98,301,969
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AR 2 datasets
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 160 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 182 bp overlap
BATF3 1 dataset
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 74 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 152 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 184 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 220 bp overlap
CEBPB 2 datasets
ChIP MCF-7 ENCFF772ZTQ 225 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 130 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 219 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 283 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 155 bp overlap
ChIP GM12878 ENCFF167CZS 321 bp overlap
EHMT2 5 datasets
ChIP A-549 ENCSR321BJQ.EHMT2.A-549 281 bp overlap
ChIP A549 ENCFF026GWM 325 bp overlap
ChIP HepG2 ENCFF004KYI 410 bp overlap
ChIP K-562 ENCSR175EOM.EHMT2.K-562 411 bp overlap
ChIP K562 ENCFF053BWO 233 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 97 bp overlap
ESR1 3 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 110 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 103 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 117 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 56 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
HCFC1 1 dataset
ChIP MCF-7 ENCFF595ZTV 324 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 276 bp overlap
HNF4A 2 datasets
ChIP IM95 GSE114018.HNF4A.IM95 144 bp overlap
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 182 bp overlap
IRF4 3 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 113 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 113 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 201 bp overlap
JUN 1 dataset
ChIP WTC11 ENCFF172UDA 348 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 180 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MIER1 2 datasets
ChIP K-562 ENCSR426MDV.MIER1.K-562 307 bp overlap
ChIP K562 ENCFF584AYC 330 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 206 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 137 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 347 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 179 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 79 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCSR829WBA.OVOL1.MCF-7 223 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 134 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 146 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 396 bp overlap
RAD21 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 129 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REST 64 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 411 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 411 bp overlap
ChIP A549 ENCFF148AIS 382 bp overlap
ChIP CD4 GSE49570.REST.CD4 251 bp overlap
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
ChIP GM12878 ENCFF235NGC 224 bp overlap
ChIP GM12878 ENCFF943QPB 241 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 411 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 411 bp overlap
ChIP GM23338 ENCFF024TCL 219 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 411 bp overlap
ChIP GP5D GSE51234.REST.GP5D 411 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 411 bp overlap
ChIP H1 ENCFF203SWY 400 bp overlap
ChIP H1 ENCFF429RUE 269 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 411 bp overlap
ChIP HCT116 ENCFF929AYY 224 bp overlap
ChIP HEK293 ENCFF073DOT 324 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 411 bp overlap
ChIP HL-60 ENCFF589LOF 331 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 411 bp overlap
ChIP HeLa-S3 ENCFF911DTC 232 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 411 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 411 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 259 bp overlap
ChIP HepG2 ENCFF122AWR 241 bp overlap
ChIP HepG2 ENCFF800JSL 202 bp overlap
ChIP Ishikawa ENCFF456OHV 411 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 411 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 411 bp overlap
ChIP K-562 GSE70482.REST.K-562 324 bp overlap
ChIP K562 ENCFF430APM 215 bp overlap
ChIP K562 ENCFF688UKW 353 bp overlap
ChIP K562 ENCFF758CZL 411 bp overlap
ChIP K562 ENCFF758CZL 411 bp overlap
ChIP MCF-7 ENCFF893RRD 390 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 326 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 299 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 411 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 411 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 340 bp overlap
ChIP PFSK-1 ENCFF668WMP 219 bp overlap
ChIP PFSK-1 ENCFF845VHA 275 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 411 bp overlap
ChIP Panc1 ENCFF338WSQ 251 bp overlap
ChIP Panc1 ENCFF518EEQ 263 bp overlap
ChIP Panc1 ENCFF629OJO 258 bp overlap
ChIP SK-N-SH ENCFF635KBN 228 bp overlap
ChIP SK-N-SH ENCFF861MKH 231 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 166 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 353 bp overlap
ChIP hepatocyte ERP000395.REST.hepatocyte 170 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 291 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 284 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 284 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 282 bp overlap
ChIP hippocampus GSE144226.REST.hippocampus 254 bp overlap
ChIP liver ENCFF240FWT 256 bp overlap
ChIP liver ENCFF577AZT 307 bp overlap
ChIP liver ENCSR867WPH.REST.liver 411 bp overlap
ChIP liver ENCSR893QWP.REST.liver 411 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 411 bp overlap
ChIP neural ENCSR000BTV.REST.neural 273 bp overlap
ChIP neural cell ENCFF882LXX 344 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 243 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000BIS.SIN3A.WA01 122 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 139 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 291 bp overlap
SMARCA4 7 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 185 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 341 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 182 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 205 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 237 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 319 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 185 bp overlap
SMARCB1 5 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 255 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 325 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 247 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 243 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 217 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 250 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 295 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 375 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 166 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 274 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 276 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 227 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 125 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 95 bp overlap
TEAD4 2 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 285 bp overlap
ChIP A549 ENCFF243FTL 195 bp overlap
TFAP2A 3 datasets
ChIP MCF-7 GSE60270.TFAP2A.MCF-7 241 bp overlap
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 408 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 153 bp overlap
TFAP2C 4 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 255 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 407 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 411 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 397 bp overlap
ZBTB33 2 datasets
ChIP GM12878 ENCFF818EFA 263 bp overlap
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 364 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCFF346DYM 411 bp overlap
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 293 bp overlap
ZNF133 1 dataset
ChIP HEK293T GSE78099.ZNF133.HEK293T 112 bp overlap
ZNF143 4 datasets
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 233 bp overlap
ChIP GM12878 ENCSR000DZL.ZNF143.GM12878 110 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 206 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 128 bp overlap
ZNF24 1 dataset
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 191 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 378 bp overlap
Zbtb2 1 dataset
Motif DE_12h DE_12h-Zbtb2_MA2340.1 10 bp overlap