chr12 : 79,911,719 79,912,193
474 bp 119 TFs 0 linked genes
This 474 bp open chromatin element has no linked target genes and is bound by 119 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:79,906,719 – 79,917,193
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 142 bp overlap
Arid3a 2 datasets
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
BARX1 1 dataset
Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 203 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 185 bp overlap
BSX 1 dataset
Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 159 bp overlap
CREB1 1 dataset
Motif DE_36h DE_36h-CREB1_MA0018.5 8 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 255 bp overlap
DLX1 1 dataset
Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Dlx2 1 dataset
Motif DE_36h DE_36h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_36h DE_36h-Dlx5_MA1476.3 8 bp overlap
EGR4 1 dataset
Motif DE_36h DE_36h-EGR4_MA0733.2 11 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 272 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 196 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE68356.ESR1.MCF-7 195 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 293 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 327 bp overlap
ChIP DE DE-FOXA2-2 345 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 295 bp overlap
ChIP DE DE-GATA4-2 433 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 276 bp overlap
ChIP DE DE-GATA6-2 463 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 441 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 438 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 445 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 420 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 474 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 463 bp overlap
GBX2 1 dataset
Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 385 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 251 bp overlap
HESX1 1 dataset
Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap
HOXA10 1 dataset
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
HOXA6 1 dataset
Motif DE_36h DE_36h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif DE_36h DE_36h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_36h DE_36h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_36h DE_36h-HOXB8_MA1502.2 7 bp overlap
HOXC13 1 dataset
Motif DE_36h DE_36h-HOXC13_MA0907.2 9 bp overlap
HOXD8 1 dataset
Motif DE_36h DE_36h-HOXD8_MA0910.3 7 bp overlap
HOXD9 1 dataset
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
Hmga1 1 dataset
Motif DE_36h DE_36h-Hmga1_MA2124.1 8 bp overlap
Hmx1 1 dataset
Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_36h DE_36h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 140 bp overlap
KLF1 1 dataset
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
KLF2 1 dataset
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 331 bp overlap
LBX2 1 dataset
Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap
LHX6 1 dataset
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
MSX1 1 dataset
Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 53 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 351 bp overlap
Msx3 1 dataset
Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 137 bp overlap
NR2C1 1 dataset
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 169 bp overlap
Nkx3-2 1 dataset
Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap
Nobox 1 dataset
Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
Nr5A2 1 dataset
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
PHOX2A 2 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 307 bp overlap
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
POU1F1 1 dataset
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
POU4F1 1 dataset
Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap
POU5F1 1 dataset
Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 185 bp overlap
PROP1 1 dataset
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Pax7 1 dataset
Motif DE_36h DE_36h-Pax7_MA0680.3 10 bp overlap
RAX 1 dataset
Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap
RELB 2 datasets
Motif DE_36h DE_36h-RELB_MA1117.2 7 bp overlap
ChIP GM12878 ENCFF217ADF 63 bp overlap
RUNX3 1 dataset
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 309 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15690 GSE132290.SMARCA4.A-549_AG15690 218 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 419 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 305 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 54 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 175 bp overlap
Sox17 1 dataset
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Sox7 1 dataset
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 171 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 171 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_36h DE_36h-TFAP2C_MA0524.3 11 bp overlap
THRB 1 dataset
Motif DE_36h DE_36h-THRB_MA1575.2 17 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 126 bp overlap
Tbx6 2 datasets
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
VENTX 1 dataset
Motif DE_36h DE_36h-VENTX_MA0724.1 9 bp overlap
VEZF1 1 dataset
Motif DE_36h DE_36h-VEZF1_MA1578.2 6 bp overlap
ZBTB12 1 dataset
Motif DE_36h DE_36h-ZBTB12_MA1649.2 7 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 279 bp overlap
ZNF135 1 dataset
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
ZNF157 1 dataset
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 332 bp overlap
ZNF211 1 dataset
Motif DE_36h DE_36h-ZNF211_MA1974.2 10 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 377 bp overlap
ZNF282 1 dataset
Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap
ZNF320 1 dataset
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
ZNF667 1 dataset
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
ZNF701 1 dataset
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
ZNF740 1 dataset
Motif DE_36h DE_36h-ZNF740_MA0753.3 10 bp overlap
ZNF75A 1 dataset
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
ZNF770 3 datasets
ChIP HEK293 ENCFF468FCG 276 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 260 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 206 bp overlap