chr1 : 23,035,998 23,036,338
340 bp 79 TFs 0 linked genes
This 340 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:23,030,998 – 23,041,338
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
BCL11B 2 datasets
ChIP HEK293 ENCFF859UHP 331 bp overlap
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 270 bp overlap
BRD4 1 dataset
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 248 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 188 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCFF003PDY 286 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 253 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 270 bp overlap
ChIP neural cell ENCFF442QNK 102 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 340 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 297 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 233 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 340 bp overlap
ChIP DE DE-FOXA2-2 328 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 306 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 340 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 340 bp overlap
ChIP DE DE-GATA4-2 340 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 340 bp overlap
ChIP DE DE-GATA6-2 340 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 271 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 318 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 340 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 340 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 315 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 319 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 340 bp overlap
GFI1B 2 datasets
ChIP HEK293 ENCFF264FBS 325 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 304 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 200 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 264 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 167 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 313 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCFF252CFL 340 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 186 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 308 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 315 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 202 bp overlap
KLF9 2 datasets
ChIP HEK293 ENCFF588INF 155 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 89 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 335 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 310 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 214 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 233 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 258 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 288 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 250 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 340 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 262 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 201 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 203 bp overlap
PATZ1 3 datasets
ChIP HEK293 ENCFF016MNJ 340 bp overlap
ChIP HEK293 ENCFF016MNJ 132 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 233 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 227 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 179 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 340 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 340 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 286 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 313 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 223 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 193 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 340 bp overlap
SMARCA4 4 datasets
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 212 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 320 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 340 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 184 bp overlap
SMARCC1 1 dataset
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 267 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 306 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 268 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 296 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 335 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 316 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 82 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF582MWI 340 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 236 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 248 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 240 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 256 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 340 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 204 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 285 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 340 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 144 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 174 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 315 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 180 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 219 bp overlap
ZKSCAN1 2 datasets
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 123 bp overlap
ChIP K562 ENCFF977CBA 197 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 250 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 340 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 284 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 184 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 237 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 192 bp overlap
ZNF362 3 datasets
ChIP HEK293 ENCFF436CGE 273 bp overlap
ChIP HEK293 ENCFF436CGE 340 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 215 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 340 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 268 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 154 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCFF399XKF 340 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 132 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 228 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 330 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 247 bp overlap
ZNF596 3 datasets
ChIP HEK293 ENCFF854MGB 224 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 321 bp overlap
ChIP HEK293 GSE76494.ZNF596.HEK293 233 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 340 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 340 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 283 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 298 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 340 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 157 bp overlap
ZNF843 3 datasets
ChIP HEK293 ENCFF241QRH 318 bp overlap
ChIP HEK293 ENCFF241QRH 117 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 285 bp overlap
ZSCAN16 2 datasets
ChIP HEK293 ENCSR864VJE.ZSCAN16.HEK293 220 bp overlap
ChIP HEK293 GSE76494.ZSCAN16.HEK293 178 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 340 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 288 bp overlap