chr11 : 8,016,443 8,016,699
256 bp 63 TFs 2 linked genes
This 256 bp open chromatin element is linked to CASC23 and TUB and is bound by 63 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
CASC23 at TSS At TSS Proximity
TUB 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:8,011,443 – 8,021,699
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 135 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 214 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 256 bp overlap
BRD2 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 77 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 77 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 256 bp overlap
ChIP H1 ENCFF991MKH 76 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 251 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 186 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 160 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 256 bp overlap
ESR1 12 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 145 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 181 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 197 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 204 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 120 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 146 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 130 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 157 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 179 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 148 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 193 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 208 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 190 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 256 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 256 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 113 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 126 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 243 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 114 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 248 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 165 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 184 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 256 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 256 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 256 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 256 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 256 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 256 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 203 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 116 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
MAFK 1 dataset
ChIP H1 ENCFF854XWE 256 bp overlap
MYBL2 1 dataset
Motif DE_12h DE_12h-MYBL2_MA0777.1 15 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
NANOG 5 datasets
ChIP H1 ENCFF747ZPQ 239 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 256 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 144 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 256 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 242 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
POU5F1 10 datasets
ChIP GM23338 ENCFF333SNB 256 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 256 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 243 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 256 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 192 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 197 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 256 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 256 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 256 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 256 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 169 bp overlap
ChIP H1 ENCFF896IJG 244 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 226 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 216 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 256 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 210 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 224 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 157 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 196 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 131 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 254 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 184 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 51 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 152 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 111 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
XBP1 1 dataset
Motif DE_12h DE_12h-XBP1_MA0844.2 11 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 256 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 206 bp overlap
ZNF331 3 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ChIP GM23338 ENCFF410NSZ 211 bp overlap
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 142 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 177 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 147 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 126 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap