chr10 : 96,039,077 96,039,383
306 bp 72 TFs 1 linked gene
This 306 bp open chromatin element is linked to CCNJ and is bound by 72 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CCNJ 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:96,034,077 – 96,044,383
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 137 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 209 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 153 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 187 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 229 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 177 bp overlap
ERG 3 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 163 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 158 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 167 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 300 bp overlap
ETS1 2 datasets
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 79 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 291 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 263 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 279 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 200 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 200 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 215 bp overlap
ChIP DE DE-FOXA2-1 306 bp overlap
ChIP DE DE-FOXA2-2 306 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 176 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 263 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 197 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 238 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 243 bp overlap
GATA2 10 datasets
ChIP HUVEC-C GSE109625.GATA2.HUVEC-C 179 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.GATA2.HUVEC-C_VEGF_12h 179 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.GATA2.HUVEC-C_VEGF_1h 163 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.GATA2.HUVEC-C_VEGF_4h 232 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 137 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 137 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 241 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 191 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 276 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 279 bp overlap
GATA3 2 datasets
ChIP MCF-7 GSE51274.GATA3.MCF-7 182 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 196 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 277 bp overlap
ChIP DE DE-GATA4-2 306 bp overlap
ChIP foregut GSE117136.GATA4.foregut 302 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 302 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 306 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 284 bp overlap
ChIP DE DE-GATA6-2 306 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 246 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 215 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 205 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 283 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 225 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 306 bp overlap
ChIP K562 ENCFF348IBL 219 bp overlap
ChIP K562 ENCFF771OHZ 306 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 102 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 80 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 306 bp overlap
MYB 2 datasets
ChIP MOLT-3 GSE59657.MYB.MOLT-3 144 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 205 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 218 bp overlap
MYOG 3 datasets
ChIP RH4 GSE83726.MYOG.RH4 232 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 190 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 206 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 62 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 226 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 115 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 240 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 185 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF303XUJ 306 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 107 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 219 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 306 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 261 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 274 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 245 bp overlap
RELA 19 datasets
ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 129 bp overlap
ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 129 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 182 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 253 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 276 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 268 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 176 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 123 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 280 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 281 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 254 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 306 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 158 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 211 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 168 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 57 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 300 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 154 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 293 bp overlap
RUNX1 4 datasets
ChIP MCF-10A GSE129314.RUNX1.MCF-10A 281 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 240 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 240 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 168 bp overlap
RUNX1T1 2 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 206 bp overlap
ChIP Kasumi-1_shTAF1-AE GSE115115.RUNX1T1.Kasumi-1_shTAF1-AE 222 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 306 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 259 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 305 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 306 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 172 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 126 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 162 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 289 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 290 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 229 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 198 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 306 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 249 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 123 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 64 bp overlap
TAL1 4 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 211 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 248 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 274 bp overlap
TCF12 1 dataset
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 281 bp overlap
TCF3 2 datasets
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 236 bp overlap
ChIP RPMI8402 GSE39179.TCF3.RPMI8402 199 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 182 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 231 bp overlap
YY1 2 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 181 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 182 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 228 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 179 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 270 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 195 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 159 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 280 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 172 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 101 bp overlap
ZNF770 3 datasets
ChIP HEK293 ENCFF468FCG 178 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 92 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 175 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 204 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 306 bp overlap