chr10 : 56,585,990 – 56,586,934
944 bp 105 TFs 0 linked genes
This 944 bp open chromatin element has no linked target genes and is bound by 105 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:56,580,990 – 56,591,934
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
105 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 192 bp overlap
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 163 bp overlap
BRD2 2 datasets
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 257 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 469 bp overlap
BRD4 2 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 199 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 270 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 321 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 399 bp overlap
CHD8 3 datasets
ChIP T-47D GSE62428.CHD8.T-47D 160 bp overlap
ChIP T-47D GSE62428.CHD8.T-47D 294 bp overlap
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 364 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 246 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 212 bp overlap
CTCF 24 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 461 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 284 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 367 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 346 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 272 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 493 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 144 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 243 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 161 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 216 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 255 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 181 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 153 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 246 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 265 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 428 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF364PUR 271 bp overlap
ChIP BLaER1 ENCFF460KDD 250 bp overlap
Ddit3::Cebpa 2 datasets
Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap
Motif ES_0h ES_0h-Ddit3Cebpa_MA0019.2 10 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EPAS1 1 dataset
ChIP 501-mel GSE95280.EPAS1.501-mel 326 bp overlap
ERF::FIGLA 1 dataset
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
ERF::SREBF2 2 datasets
Motif DE_12h DE_12h-ERFSREBF2_MA1939.2 16 bp overlap
Motif ES_0h ES_0h-ERFSREBF2_MA1939.2 16 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 166 bp overlap
ESR1 12 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 469 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 223 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 244 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 266 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 272 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 533 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 260 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 71 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 489 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 429 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 265 bp overlap
ChIP breast_tumor_Male_15 GSE104399.ESR1.breast_tumor_Male_15 278 bp overlap
ETV2::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
EWSR1-FLI1 3 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 90 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXA1 2 datasets
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 182 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 181 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA3 3 datasets
ChIP T-47D GSE51274.GATA3.T-47D 272 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 240 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 843 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 332 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 276 bp overlap
GRHL2 2 datasets
ChIP HBE GSE46194.GRHL2.HBE 211 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 615 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 777 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 311 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 206 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 141 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 208 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 379 bp overlap
LMO2 2 datasets
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 183 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 176 bp overlap
MAX 4 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 120 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 283 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 164 bp overlap
ChIP WTC11 ENCFF223QFY 583 bp overlap
MED1 3 datasets
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 469 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 175 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 346 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
MYC 2 datasets
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 161 bp overlap
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 228 bp overlap
MYOD1 2 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 506 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 123 bp overlap
Mecom 1 dataset
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
NFIA 2 datasets
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIC 2 datasets
Motif DE_12h DE_12h-NFIC_MA0161.3 7 bp overlap
Motif ES_0h ES_0h-NFIC_MA0161.3 7 bp overlap
NFIX 2 datasets
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 73 bp overlap
NR3C1 2 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 106 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 261 bp overlap
PGR 10 datasets
ChIP T-47D GSE31129.PGR.T-47D 407 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 728 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 661 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 733 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 776 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 531 bp overlap
ChIP T-47D_progesterone_siCEBPA GSE132649.PGR.T-47D_progesterone_siCEBPA 277 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 210 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 300 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 444 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 252 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 568 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RAD21 6 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 297 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 127 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 153 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 159 bp overlap
RBPJ 1 dataset
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 269 bp overlap
REST 3 datasets
ChIP WA01 ENCSR000BHM.REST.WA01 197 bp overlap
ChIP neural ENCSR000BTV.REST.neural 119 bp overlap
ChIP neural ENCSR000BTV.REST.neural 220 bp overlap
RFX7 1 dataset
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
RUNX2 1 dataset
Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SCRT1 1 dataset
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMAD5 1 dataset
Motif DE_12h DE_12h-SMAD5_MA1557.1 10 bp overlap
SMC1A 3 datasets
ChIP MCF-7 GSE115602.SMC1A.MCF-7 169 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 151 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 148 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 145 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 648 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 338 bp overlap
SPI1 2 datasets
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 135 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 203 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
STAT3 8 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 412 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 242 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 248 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 487 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 631 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 598 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 689 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 557 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 158 bp overlap
TEAD4 1 dataset
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 229 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 127 bp overlap
Thap11 3 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 126 bp overlap
ZBTB32 1 dataset
Motif DE_12h DE_12h-ZBTB32_MA1580.1 10 bp overlap
ZFP14 3 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZNF143 2 datasets
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 151 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 115 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF189 3 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF317 1 dataset
ChIP WTC11 ENCFF537KXI 357 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 233 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF680 3 datasets
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
Motif DE_24h DE_24h-ZNF680_MA1729.2 11 bp overlap
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
ZSCAN21 1 dataset
Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Huangfu Lab · Publications · Resources · Contact