chr9 : 85,172,756 85,173,117
361 bp 76 TFs 1 linked gene
This 361 bp open chromatin element is linked to ENSG00000285556 and is bound by 76 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000285556 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:85,167,756 – 85,178,117
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
AR 1 dataset
ChIP myofibroblast GSE90772.AR.myofibroblast 276 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 58 bp overlap
ATF4 2 datasets
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 337 bp overlap
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 241 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 361 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 285 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF010ZUU 238 bp overlap
ChIP GM12878 ENCFF521IZR 209 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 246 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 243 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 183 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 361 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 241 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 272 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 158 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 158 bp overlap
CTCF 25 datasets
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 107 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 91 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 125 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 132 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 342 bp overlap
ChIP SEM GSE117864.CTCF.SEM 82 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 50 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 181 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 312 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 236 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 151 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 99 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 167 bp overlap
ChIP keratinocyte ENCFF046PBT 117 bp overlap
ChIP keratinocyte ENCFF291YDC 117 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 249 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 107 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 97 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 121 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 171 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 153 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 169 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 66 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 146 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 243 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 81 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 282 bp overlap
ChIP BLaER1 ENCFF274GAT 244 bp overlap
ChIP BLaER1 ENCFF364PUR 272 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 310 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 236 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 220 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 241 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF039QRE 321 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 179 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 350 bp overlap
ChIP DE DE-FOXA2-2 356 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 317 bp overlap
ChIP DE DE-GATA4-2 361 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 348 bp overlap
ChIP DE DE-GATA6-2 361 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 323 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 311 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 147 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 361 bp overlap
ChIP GM12878 ENCFF824TGK 154 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 361 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 361 bp overlap
ChIP GM12878 ENCFF918AID 333 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 273 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 263 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 361 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 111 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 299 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 240 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 294 bp overlap
MEIS1 1 dataset
ChIP SEM GSE38339.MEIS1.SEM 182 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 361 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 334 bp overlap
MTA2 3 datasets
ChIP GM12878 ENCFF615CWQ 276 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 361 bp overlap
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 202 bp overlap
MYB 2 datasets
ChIP PF-382 GSE94000.MYB.PF-382 215 bp overlap
ChIP SEM GSE117864.MYB.SEM 191 bp overlap
MYC 1 dataset
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 176 bp overlap
NBN 3 datasets
ChIP GM12878 ENCFF213ZNN 282 bp overlap
ChIP GM12878 ENCFF213ZNN 361 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 170 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 361 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 326 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 181 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 289 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 169 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 204 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 239 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 290 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 133 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 285 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 153 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 179 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 310 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 181 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 334 bp overlap
RUNX1 5 datasets
ChIP 697 GSE138031.RUNX1.697 320 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 233 bp overlap
ChIP MCF-10A GSE129314.RUNX1.MCF-10A 253 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 287 bp overlap
ChIP keratinocyte GSE98483.RUNX1.keratinocyte 239 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 343 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 160 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 185 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 359 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 208 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 361 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 361 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 344 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 271 bp overlap
SMARCA4 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 225 bp overlap
SMC1A 2 datasets
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 223 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 329 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 304 bp overlap
SOX2 1 dataset
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 280 bp overlap
STAG2 1 dataset
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 203 bp overlap
STAT3 6 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 258 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 191 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 189 bp overlap
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 52 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 55 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 191 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 310 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 361 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 214 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 164 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 260 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 103 bp overlap
TP53 2 datasets
ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 85 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 124 bp overlap
TP63 10 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 178 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 80 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 134 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 190 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 258 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 163 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 237 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 196 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 231 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 216 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 224 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 116 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 283 bp overlap