chr1 : 169,325,181 169,325,554
373 bp 76 TFs 0 linked genes
This 373 bp open chromatin element has no linked target genes and is bound by 76 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:169,320,181 – 169,330,554
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 152 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 145 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 253 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 322 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 167 bp overlap
EHF 2 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF1 5 datasets
ChIP A-549 GSE122203.ELF1.A-549 167 bp overlap
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 208 bp overlap
ChIP K562 ENCFF496AKI 235 bp overlap
ELF2 2 datasets
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
Motif ES_0h ES_0h-ELF2_MA1483.3 10 bp overlap
ELF3 4 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 342 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 347 bp overlap
ELF4 2 datasets
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
Motif ES_0h ES_0h-ELF4_MA0641.1 12 bp overlap
ELK4 2 datasets
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
Motif ES_0h ES_0h-ELK4_MA0076.3 9 bp overlap
ESR1 1 dataset
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 123 bp overlap
ESRRA 2 datasets
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
Motif ES_0h ES_0h-ESRRA_MA0592.4 9 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV6 2 datasets
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
Motif ES_0h ES_0h-ETV6_MA0645.2 9 bp overlap
ETV7 2 datasets
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Motif ES_0h ES_0h-ETV7_MA1708.2 9 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 139 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 105 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 288 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 128 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 208 bp overlap
HSF2 1 dataset
Motif ES_0h ES_0h-HSF2_MA0770.1 13 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 333 bp overlap
ChIP K562 ENCFF348IBL 373 bp overlap
ChIP K562 ENCFF771OHZ 373 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 1 dataset
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 294 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 180 bp overlap
KLF1 1 dataset
ChIP HEK293 GSE76494.KLF1.HEK293 142 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MAZ 3 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 189 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 192 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 168 bp overlap
MYOD1 4 datasets
ChIP RD GSE137168.MYOD1.RD 246 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 266 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 252 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 277 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 140 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 124 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PBX1 2 datasets
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
Motif ES_0h ES_0h-PBX1_MA0070.2 9 bp overlap
PBX3 2 datasets
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
PPARG 2 datasets
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 373 bp overlap
Plagl1 2 datasets
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
Motif ES_0h ES_0h-Plagl1_MA1615.2 8 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap
SETX 1 dataset
ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 185 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 214 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 201 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 281 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPI1 2 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 181 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 151 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TBP 3 datasets
ChIP hESC GSE122298.TBP.hESC 180 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 115 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 181 bp overlap
USF1 4 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 198 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 179 bp overlap
ZBTB11 2 datasets
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
Motif ES_0h ES_0h-ZBTB11_MA2329.1 9 bp overlap
ZBTB6 4 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ChIP HEK293 ENCFF881ECZ 250 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 219 bp overlap
ZBTB7A 2 datasets
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
Motif ES_0h ES_0h-ZBTB7A_MA0750.3 9 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 158 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF175 2 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF350 1 dataset
ChIP HEK293 GSE76494.ZNF350.HEK293 152 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 217 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 244 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 239 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF808 1 dataset
ChIP HEK293T GSE78099.ZNF808.HEK293T 160 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap