chr8 : 64,380,474 64,380,806
332 bp 67 TFs 1 linked gene
This 332 bp open chromatin element is linked to MIR124-2HG and is bound by 67 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MIR124-2HG 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:64,375,474 – 64,385,806
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 200 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 137 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 203 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 280 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 224 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 279 bp overlap
BRD4 3 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 281 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 332 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 219 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 211 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 110 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 174 bp overlap
CTCF 61 datasets
ChIP 22Rv1 ENCFF466OXN 332 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 204 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 285 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 144 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 144 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 200 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 186 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 188 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 150 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 130 bp overlap
ChIP GM12872 ENCFF697BYI 236 bp overlap
ChIP GM23338 ENCFF531QOI 205 bp overlap
ChIP GM23338 ENCFF772DML 123 bp overlap
ChIP H1 ENCFF230QSV 66 bp overlap
ChIP H1 ENCFF414GZI 209 bp overlap
ChIP H1 ENCFF764RHO 172 bp overlap
ChIP H9 ENCFF152GTF 251 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 160 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 227 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 106 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 138 bp overlap
ChIP K562 ENCFF111MGE 233 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 123 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 133 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 265 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 264 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 183 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 154 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 176 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 178 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 269 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 275 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 225 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 222 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 222 bp overlap
ChIP endodermal cell ENCFF471YCZ 230 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 126 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 193 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 313 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 195 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 212 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 185 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 332 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 216 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 138 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 214 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 183 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 308 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 146 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 176 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 220 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 243 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 213 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 332 bp overlap
ChIP neural cell ENCFF335ADI 332 bp overlap
ChIP neural progenitor cell ENCFF420RBO 153 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 293 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 192 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 222 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 303 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 267 bp overlap
ChIP BLaER1 ENCFF335XTP 331 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 124 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 147 bp overlap
ESR1 4 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 122 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 261 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 225 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 232 bp overlap
EZH2 10 datasets
ChIP A673 ENCFF955JRZ 332 bp overlap
ChIP A673 ENCFF955JRZ 118 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 288 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 332 bp overlap
ChIP PC-3 ENCFF855OUB 294 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 118 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 313 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 291 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 304 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 332 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 332 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 218 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 128 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 267 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 207 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 147 bp overlap
ChIP H1 ENCFF353UJQ 332 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 227 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 257 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 234 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 260 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94782.MYCN.Kelly 198 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 212 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 332 bp overlap
NRF1 8 datasets
ChIP H1 ENCFF582PEJ 208 bp overlap
ChIP HCC1954 GSE67867.NRF1.HCC1954 174 bp overlap
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 185 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 241 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 146 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 194 bp overlap
ChIP K562 ENCFF130SGK 151 bp overlap
ChIP WA01 ENCSR000ECC.NRF1.WA01 171 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 286 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 263 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 172 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 178 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 198 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 241 bp overlap
RAD21 6 datasets
ChIP H1 ENCFF698EWO 198 bp overlap
ChIP H1 ENCFF967OJF 191 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 165 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 206 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 127 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 162 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 200 bp overlap
REST 25 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 332 bp overlap
ChIP GM12878 ENCFF235NGC 197 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 168 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 226 bp overlap
ChIP GM23338 ENCFF024TCL 228 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 328 bp overlap
ChIP H1 ENCFF429RUE 121 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 332 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 332 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 161 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 166 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 332 bp overlap
ChIP K562 ENCFF430APM 208 bp overlap
ChIP K562 ENCFF758CZL 234 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 185 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 102 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 332 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 304 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 332 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 332 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 311 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 158 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 165 bp overlap
ChIP liver ENCSR867WPH.REST.liver 324 bp overlap
ChIP neural cell ENCFF882LXX 290 bp overlap
RNF2 2 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 67 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 332 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 204 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 310 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 127 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 158 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 168 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 181 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 315 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 171 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 269 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 216 bp overlap
SUZ12 4 datasets
ChIP LNCaP GSE39459.SUZ12.LNCaP 332 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 332 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 332 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 221 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 264 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 205 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 199 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 204 bp overlap
TP63 3 datasets
ChIP foreskin GSE126390.TP63.foreskin 82 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 235 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 156 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 221 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 227 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 139 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 280 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 100 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 332 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 332 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 173 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF331 2 datasets
ChIP GM23338 ENCFF410NSZ 61 bp overlap
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 246 bp overlap
ZNF772 1 dataset
ChIP HepG2 ENCFF728OGE 56 bp overlap
ZNF785 1 dataset
ChIP K562 ENCFF129OJP 280 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap