chr7 : 42,065,956 42,066,300
344 bp 73 TFs 0 linked genes
This 344 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:42,060,956 – 42,071,300
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 344 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 250 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 344 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 141 bp overlap
BRD4 2 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 136 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 297 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 224 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 344 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 179 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 344 bp overlap
EZH2 2 datasets
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 167 bp overlap
ChIP neural progenitor cell ENCFF018MKA 253 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 226 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 344 bp overlap
FOXA1 4 datasets
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 204 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 223 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 296 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 210 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 344 bp overlap
ChIP DE DE-FOXA2-2 344 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 280 bp overlap
FOXF1 1 dataset
ChIP GIST48 GSE106624.FOXF1.GIST48 261 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 300 bp overlap
ChIP DE DE-GATA4-2 265 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 229 bp overlap
ChIP DE DE-GATA6-2 339 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 305 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 336 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 225 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 234 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 242 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 199 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 256 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 192 bp overlap
MED1 11 datasets
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 316 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 232 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 340 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 319 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 344 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 284 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 335 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 226 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 215 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 329 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 296 bp overlap
MYC 1 dataset
ChIP HeLa GSE44672.MYC.HeLa 133 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 285 bp overlap
NANOG 9 datasets
ChIP H1 ENCFF747ZPQ 211 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 321 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 301 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 197 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 344 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 344 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 344 bp overlap
ChIP hESC GSE20650.NANOG.hESC 227 bp overlap
ChIP hESC GSE18292.NANOG.hESC 108 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 177 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 202 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 208 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 139 bp overlap
NR3C1 1 dataset
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 171 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 344 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 344 bp overlap
OVOL3 1 dataset
ChIP HEK293 ENCFF898STB 344 bp overlap
PAX6 1 dataset
ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 187 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 339 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 296 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 236 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 344 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 110 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 257 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 344 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 344 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 200 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 316 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 342 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 344 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 344 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 234 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 277 bp overlap
SMARCA2 4 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 254 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 205 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 244 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 156 bp overlap
SMARCA4 7 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 155 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 211 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 344 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 344 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 344 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 344 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 237 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 150 bp overlap
SOX2 10 datasets
ChIP HNSC GSE69479.SOX2.HNSC 339 bp overlap
ChIP LK2 GSE137459.SOX2.LK2 291 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 344 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 344 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 344 bp overlap
ChIP NPC GSE122631.SOX2.NPC 260 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 286 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 268 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 243 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 321 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 266 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 227 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 255 bp overlap
TCF7L2 3 datasets
ChIP HEK293 ENCFF513JQN 344 bp overlap
ChIP HEK293 ENCFF513JQN 214 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 264 bp overlap
TEAD1 2 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 117 bp overlap
ChIP adipocyte GSE140782.TEAD1.adipocyte 280 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 164 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF265CEM 344 bp overlap
ChIP HEK293 ENCFF582MWI 344 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 344 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 190 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 281 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 285 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 344 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCFF809BPK 344 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 344 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 283 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 206 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 61 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 256 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 337 bp overlap
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 216 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 344 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 292 bp overlap
ZNF680 1 dataset
ChIP HEK293 GSE76494.ZNF680.HEK293 182 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 291 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 344 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 344 bp overlap
ZXDB 3 datasets
ChIP HEK293 ENCFF835SGA 344 bp overlap
ChIP HEK293 ENCFF835SGA 287 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 344 bp overlap