chr6 : 170,269,480 – 170,269,760
280 bp 81 TFs 0 linked genes
This 280 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:170,264,480 – 170,274,760
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
AHR 2 datasets
ChIP MCF-7_TCDD_1d GSE90550.AHR.MCF-7_TCDD_1d 130 bp overlap
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 154 bp overlap
ARNT 2 datasets
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 238 bp overlap
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 193 bp overlap
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 127 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 186 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 158 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 153 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 79 bp overlap
BRD4 10 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 121 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 280 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 252 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 250 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 280 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 280 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 243 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 244 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 280 bp overlap
ChIP thyroid-cancer GSE114068.BRD4.thyroid-cancer 280 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 280 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 114 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 157 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 177 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 158 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 280 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 54 bp overlap
CTCF 1 dataset
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 65 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 123 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 95 bp overlap
ESR1 44 datasets
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 186 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 103 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 198 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 280 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 186 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 107 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 121 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 68 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 93 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 210 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 112 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 85 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 139 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 124 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 57 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 113 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 66 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 56 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 83 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 140 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 102 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 160 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 73 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 104 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 116 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 137 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 62 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 74 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 133 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 120 bp overlap
ChIP MCF-7_vehicle_4h GSE99626.ESR1.MCF-7_vehicle_4h 192 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 133 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 142 bp overlap
ChIP T-47D_JC4729 GSE126004.ESR1.T-47D_JC4729 145 bp overlap
ChIP T-47D_JC4733 GSE126004.ESR1.T-47D_JC4733 104 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 143 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 280 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 164 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 82 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 85 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 191 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 280 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.ESR1.primary-breast-cancer_B1_DSG 122 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 280 bp overlap
ESR1_D538G 1 dataset
ChIP MCF-7_dox GSE94493.ESR1_D538G.MCF-7_dox 51 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 73 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 72 bp overlap
EZH2 2 datasets
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 218 bp overlap
ChIP HepG2 ENCFF912EIW 219 bp overlap
EZH2_phosphoT487 1 dataset
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 84 bp overlap
FOXA1 23 datasets
ChIP LNCaP GSE56288.FOXA1.LNCaP 82 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 280 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 222 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 220 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 154 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 166 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 148 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 141 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 280 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 212 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 280 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 198 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 176 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 186 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 219 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 175 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 152 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 149 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 233 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 280 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 186 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 156 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 227 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 161 bp overlap
ChIP DE DE-FOXA2-2 280 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 219 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 280 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 164 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 121 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 86 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 157 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 179 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 128 bp overlap
HIF1A 1 dataset
ChIP RCC10 GSE101063.HIF1A.RCC10 149 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 280 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 135 bp overlap
HOXB13 1 dataset
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 136 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 108 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 202 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 144 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 253 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 280 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 280 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 171 bp overlap
MAX 4 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 55 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 229 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 280 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 266 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 185 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 126 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 207 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 266 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 118 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 54 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 65 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 237 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 131 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 151 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 68 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 280 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 180 bp overlap
POLR2A 10 datasets
ChIP body of pancreas ENCFF084VJR 280 bp overlap
ChIP body of pancreas ENCFF501FEC 273 bp overlap
ChIP body of pancreas ENCFF501FEC 195 bp overlap
ChIP body of pancreas ENCFF675RCN 280 bp overlap
ChIP body of pancreas ENCFF727UBE 208 bp overlap
ChIP spleen ENCFF706IUS 280 bp overlap
ChIP transverse colon ENCFF193UMS 280 bp overlap
ChIP transverse colon ENCFF193UMS 280 bp overlap
ChIP transverse colon ENCFF610RWV 280 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 134 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 126 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 62 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 91 bp overlap
RAD21 2 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 146 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 245 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 248 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 207 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 142 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 114 bp overlap
SCRT2 2 datasets
ChIP HEK293 ENCFF711QQB 119 bp overlap
ChIP HEK293 ENCFF711QQB 50 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 251 bp overlap
SMARCB1 3 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 159 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 280 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 228 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 179 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 233 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 280 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 213 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 190 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 280 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 280 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 153 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 278 bp overlap
STAT3 22 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 149 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 74 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 280 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 218 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 280 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 233 bp overlap
ChIP MCF-7_jc5842 GSE126004.STAT3.MCF-7_jc5842 117 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 226 bp overlap
ChIP MCF-7_jc5846 GSE126004.STAT3.MCF-7_jc5846 106 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 214 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 88 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 208 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 134 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 155 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 150 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 174 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 166 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 267 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 263 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 266 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 231 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 235 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 241 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 154 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 82 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 142 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 105 bp overlap
TEAD4 1 dataset
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 94 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 57 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 280 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 159 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 144 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 157 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 172 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 79 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 280 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 146 bp overlap
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