chr6 : 156,944,408 – 156,944,838

430 bp 86 TFs 2 linked genes

This 430 bp open chromatin element is linked to ARID1B and TFB1M and is bound by 86 transcription factors.

Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ARID1B		167.3 kb	Distal	Multiome
TFB1M		1630.2 kb	Distal	Multiome+HiCAR

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

86 transcription factors

AFF1 1 dataset

ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 430 bp overlap

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 294 bp overlap

ARNT 1 dataset

ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 300 bp overlap

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 430 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 430 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 185 bp overlap

ATF6 2 datasets

Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap

Motif ES_0h ES_0h-ATF6_MA1466.2 13 bp overlap

BRD4 2 datasets

ChIP COLO-741 GSE73319.BRD4.COLO-741 391 bp overlap

ChIP SEM GSE83671.BRD4.SEM 342 bp overlap

CHD7 2 datasets

ChIP WA01 ENCSR000AVA.CHD7.WA01 86 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 296 bp overlap

CREB3L1 2 datasets

Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap

Motif ES_0h ES_0h-CREB3L1_MA0839.2 13 bp overlap

E4F1 1 dataset

ChIP GM12878 ENCSR439WAF.E4F1.GM12878 179 bp overlap

ERF::FOXI1 2 datasets

Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap

Motif ES_0h ES_0h-ERFFOXI1_MA1935.2 10 bp overlap

ERF::FOXO1 2 datasets

Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap

Motif ES_0h ES_0h-ERFFOXO1_MA1936.2 12 bp overlap

ETS1 1 dataset

ChIP hESC ENCSR534VHI.ETS1.hESC 131 bp overlap

ETV5::FOXI1 2 datasets

Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap

Motif ES_0h ES_0h-ETV5FOXI1_MA1946.2 12 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 425 bp overlap

FLI1::FOXI1 2 datasets

Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap

Motif ES_0h ES_0h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXO1::ELK3 2 datasets

Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap

Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap

FOXO1::FLI1 2 datasets

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap

Foxn1 2 datasets

Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap

Motif ES_0h ES_0h-Foxn1_MA1684.1 6 bp overlap

Hic1 2 datasets

Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap

Motif ES_0h ES_0h-Hic1_MA0739.2 8 bp overlap

Hoxa13 2 datasets

Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap

Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap

IKZF1 2 datasets

Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap

ChIP K-562 ENCSR395HWC.IKZF1.K-562 155 bp overlap

INSM1 1 dataset

Motif ES_0h ES_0h-INSM1_MA0155.1 12 bp overlap

IRF2 1 dataset

Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap

KDM5B 1 dataset

ChIP HCC2157 GSE46055.KDM5B.HCC2157 168 bp overlap

MEN1 1 dataset

ChIP SEM GSE83671.MEN1.SEM 413 bp overlap

MITF 2 datasets

Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap

Motif ES_0h ES_0h-MITF_MA0620.4 10 bp overlap

MXI1 2 datasets

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap

MYB 1 dataset

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 138 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 363 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 416 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 356 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 320 bp overlap

ChIP hESC GSE18292.NANOG.hESC 96 bp overlap

NFATC1 1 dataset

ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 430 bp overlap

NFIA 2 datasets

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap

NFIX 2 datasets

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 53 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 430 bp overlap

Nfat5 3 datasets

Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap

Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap

Nfatc2 1 dataset

Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 289 bp overlap

POLR2A 1 dataset

ChIP H1 ENCFF566JSR 430 bp overlap

POU2F1::SOX2 2 datasets

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F3 2 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap

POU5F1 15 datasets

ChIP BG03 GSE21614.POU5F1.BG03 186 bp overlap

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 244 bp overlap

Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 420 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 430 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 430 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 138 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 250 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 342 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 166 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 430 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 230 bp overlap

PRDM14 1 dataset

ChIP hESC GSE138674.PRDM14.hESC 161 bp overlap

PRDM9 2 datasets

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAD21 1 dataset

ChIP HAP1 GSE152721.RAD21.HAP1 338 bp overlap

RARA 1 dataset

Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 101 bp overlap

RBM22 3 datasets

ChIP HepG2 ENCFF292RVQ 407 bp overlap

ChIP HepG2 ENCFF561IAJ 348 bp overlap

ChIP HepG2 ENCFF561IAJ 343 bp overlap

RBPJ 1 dataset

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

RREB1 1 dataset

Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap

Rarb 1 dataset

Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 165 bp overlap

SMARCA4 7 datasets

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 149 bp overlap

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 214 bp overlap

ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 214 bp overlap

ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 77 bp overlap

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 311 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 428 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 219 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 430 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 230 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 188 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 416 bp overlap

SOX10 2 datasets

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 393 bp overlap

ChIP hESC GSE18292.SOX2.hESC 136 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 340 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 64 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 169 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

SPDEF 2 datasets

Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap

Motif ES_0h ES_0h-SPDEF_MA0686.2 10 bp overlap

SPIC 1 dataset

Motif ES_0h ES_0h-SPIC_MA0687.2 13 bp overlap

STAT1::STAT2 1 dataset

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

Spi1 1 dataset

Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap

Stat6 1 dataset

Motif ES_0h ES_0h-Stat6_MA0520.2 10 bp overlap

TBP 1 dataset

ChIP hESC_10h GSE122298.TBP.hESC_10h 153 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 382 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 430 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 367 bp overlap

TFAP4::FLI1 2 datasets

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

Motif ES_0h ES_0h-TFAP4FLI1_MA1967.2 14 bp overlap

TFCP2 2 datasets

Motif DE_12h DE_12h-TFCP2_MA1968.2 9 bp overlap

Motif ES_0h ES_0h-TFCP2_MA1968.2 9 bp overlap

TFEB 2 datasets

Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap

Motif ES_0h ES_0h-TFEB_MA0692.2 8 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

USF1 4 datasets

Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap

Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 250 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 401 bp overlap

Wt1 1 dataset

Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap

ZNF24 2 datasets

Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap

Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap

ZNF316 1 dataset

ChIP K562 ENCFF838QCD 189 bp overlap

ZNF354A 2 datasets

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap

ZNF362 1 dataset

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 135 bp overlap

ZNF384 1 dataset

Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 235 bp overlap

ZNF530 1 dataset

Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap

ZNF701 1 dataset

Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap

Zfx 1 dataset

Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap