chr6 : 144,364,748 – 144,365,157
409 bp 97 TFs 0 linked genes
This 409 bp open chromatin element has no linked target genes and is bound by 97 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:144,359,748 – 144,370,157
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
97 transcription factors
Source
Cell type
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 212 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 76 bp overlap
BRD4 4 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 185 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 299 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 77 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 164 bp overlap
Bach1::Mafk 2 datasets
Motif DE_36h DE_36h-Bach1Mafk_MA0591.2 12 bp overlap
Motif DE_48h DE_48h-Bach1Mafk_MA0591.2 12 bp overlap
Bcl11B 2 datasets
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_60h DE_60h-Bcl11B_MA1989.2 9 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 174 bp overlap
CEBPA 3 datasets
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 169 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 137 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 94 bp overlap
CEBPB 2 datasets
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 193 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 146 bp overlap
CEBPD 1 dataset
Motif DE_36h DE_36h-CEBPD_MA0836.3 8 bp overlap
CREBBP 1 dataset
ChIP monocyte_IFNg GSE131294.CREBBP.monocyte_IFNg 144 bp overlap
CTCF 2 datasets
Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 368 bp overlap
DMRTA2 2 datasets
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 248 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 270 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 145 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 308 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 263 bp overlap
ETV5::FIGLA 1 dataset
Motif DE_36h DE_36h-ETV5FIGLA_MA1945.2 14 bp overlap
Elf5 2 datasets
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 154 bp overlap
FLI1 2 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 230 bp overlap
ChIP NB4 GSE23730.FLI1.NB4 157 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 381 bp overlap
ChIP DE DE-FOXA2-2 409 bp overlap
FOXC2 2 datasets
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXH1 1 dataset
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Foxq1 2 datasets
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GABPA 2 datasets
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 392 bp overlap
ChIP DE DE-GATA4-2 409 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 348 bp overlap
ChIP DE DE-GATA6-2 383 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 346 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 387 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 339 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 371 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 378 bp overlap
HAND2 2 datasets
Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 204 bp overlap
Hnf1A 2 datasets
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 2 datasets
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
IKZF2 3 datasets
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
ISL2 2 datasets
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
Motif DE_60h DE_60h-ISL2_MA0914.2 6 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 232 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 256 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 293 bp overlap
MAF::NFE2 2 datasets
Motif DE_36h DE_36h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_48h DE_48h-MAFNFE2_MA0501.2 11 bp overlap
MXI1 1 dataset
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
MYB 3 datasets
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 226 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 162 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 246 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 100 bp overlap
NFATC3 2 datasets
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NR1D2 1 dataset
Motif DE_48h DE_48h-NR1D2_MA1532.2 15 bp overlap
NR2F2 2 datasets
ChIP liver ENCFF565JGD 409 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 229 bp overlap
Nfat5 2 datasets
Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap
Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_48h DE_48h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap
Nfe2l2 2 datasets
Motif DE_36h DE_36h-Nfe2l2_MA0150.3 11 bp overlap
Motif DE_48h DE_48h-Nfe2l2_MA0150.3 11 bp overlap
Nkx3-1 2 datasets
Motif DE_48h DE_48h-Nkx3-1_MA0124.3 7 bp overlap
Motif DE_60h DE_60h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 2 datasets
Motif DE_48h DE_48h-Nkx3-2_MA0122.4 10 bp overlap
Motif DE_60h DE_60h-Nkx3-2_MA0122.4 10 bp overlap
Nr1h3::Rxra 1 dataset
Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2e1 1 dataset
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 165 bp overlap
POLR2A 2 datasets
ChIP spleen ENCFF044PYR 134 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 260 bp overlap
POU4F1 1 dataset
Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap
POU4F3 1 dataset
Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap
RUNX1 2 datasets
ChIP 697 GSE138031.RUNX1.697 252 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 291 bp overlap
RUNX3 2 datasets
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
Motif DE_48h DE_48h-RUNX3_MA0684.3 8 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 409 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 343 bp overlap
Rarg 1 dataset
Motif DE_48h DE_48h-Rarg_MA0860.1 17 bp overlap
SIX1 2 datasets
Motif DE_36h DE_36h-SIX1_MA1118.2 9 bp overlap
Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap
SIX2 2 datasets
Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap
Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 326 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 292 bp overlap
SMARCA4 7 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 400 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 409 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 409 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 294 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 329 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 351 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 302 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 224 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 73 bp overlap
SOX14 2 datasets
Motif DE_36h DE_36h-SOX14_MA1562.2 9 bp overlap
Motif DE_48h DE_48h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 260 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 365 bp overlap
SOX18 2 datasets
Motif DE_36h DE_36h-SOX18_MA1563.2 8 bp overlap
Motif DE_48h DE_48h-SOX18_MA1563.2 8 bp overlap
SOX8 2 datasets
Motif DE_36h DE_36h-SOX8_MA0868.3 7 bp overlap
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
SPI1 4 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 318 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 181 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 209 bp overlap
SPIB 2 datasets
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 409 bp overlap
SRY 2 datasets
Motif DE_36h DE_36h-SRY_MA0084.2 7 bp overlap
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 125 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 131 bp overlap
STAT3 2 datasets
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 146 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 155 bp overlap
Spi1 3 datasets
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 208 bp overlap
TCF7L2 2 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
TFAP4::ETV1 3 datasets
Motif DE_36h DE_36h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_36h DE_36h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_48h DE_48h-TFAP4ETV1_MA1966.2 13 bp overlap
THRA 3 datasets
Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap
Motif DE_48h DE_48h-THRA_MA1969.2 18 bp overlap
Motif DE_48h DE_48h-THRA_MA1969.2 18 bp overlap
THRB 3 datasets
Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap
Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 175 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 267 bp overlap
USF1 1 dataset
Motif DE_48h DE_48h-USF1_MA0093.4 10 bp overlap
ZIC1 2 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
Motif DE_48h DE_48h-ZIC5_MA1584.2 15 bp overlap
ZKSCAN3 1 dataset
Motif DE_48h DE_48h-ZKSCAN3_MA1973.2 14 bp overlap
ZKSCAN5 2 datasets
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 397 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 384 bp overlap
ZNF140 2 datasets
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap
ZNF184 1 dataset
Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap
ZNF416 2 datasets
Motif DE_48h DE_48h-ZNF416_MA1979.2 10 bp overlap
Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 136 bp overlap
Zic2 3 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
Huangfu Lab · Publications · Resources · Contact