chr5 : 170,232,833 170,233,040
207 bp 69 TFs 1 linked gene
This 207 bp open chromatin element is linked to C5orf58 and is bound by 69 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
C5orf58 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:170,227,833 – 170,238,040
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AR 2 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 207 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 178 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 173 bp overlap
BRD4 5 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 57 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 185 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 198 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 207 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 105 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 207 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 174 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 120 bp overlap
CHD8 2 datasets
ChIP T-47D GSE62428.CHD8.T-47D 207 bp overlap
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 106 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 140 bp overlap
ChIP MDA-MB-134-VI GSE109103.CREB1.MDA-MB-134-VI 199 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 185 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 120 bp overlap
ChIP K562 ENCFF180STA 200 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 158 bp overlap
DDX21 1 dataset
ChIP A-375 GSE128080.DDX21.A-375 182 bp overlap
E2F1 1 dataset
ChIP K-562 ENCSR720HUL.E2F1.K-562 207 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 116 bp overlap
ERG 1 dataset
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 187 bp overlap
ESR1 8 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 207 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 188 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 77 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 162 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 207 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 207 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 123 bp overlap
ChIP T-47D-B GSE80358.ESR1.T-47D-B 183 bp overlap
ETS1 2 datasets
ChIP K-562 ENCSR000BKQ.ETS1.K-562 179 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 120 bp overlap
ETV4 1 dataset
ChIP T-47D GSE129803.ETV4.T-47D 207 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 176 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 61 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 207 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 109 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 206 bp overlap
GTF2F1 2 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 155 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 168 bp overlap
HCFC1 4 datasets
ChIP K-562 ENCSR000EFN.HCFC1.K-562 207 bp overlap
ChIP K562 ENCFF959WVM 146 bp overlap
ChIP MCF-7 ENCFF595ZTV 207 bp overlap
ChIP MCF-7 ENCSR697CUP.HCFC1.MCF-7 207 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 207 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 61 bp overlap
HSF1 2 datasets
ChIP NCI-H838 GSE38901.HSF1.NCI-H838 207 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 207 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 148 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 192 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 207 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 184 bp overlap
MLXIP 1 dataset
ChIP HeLa GSE125089.MLXIP.HeLa 170 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 87 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 98 bp overlap
NFKBIA 1 dataset
ChIP dermal GSE30082.NFKBIA.dermal 129 bp overlap
NFYB 4 datasets
ChIP K-562 ENCSR000EGQ.NFYB.K-562 207 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 161 bp overlap
ChIP K562 ENCFF709RXX 80 bp overlap
ChIP WTC11 ENCFF751ZTQ 207 bp overlap
NR4A1 1 dataset
ChIP K-562 ENCSR130PDE.NR4A1.K-562 207 bp overlap
NRF1 1 dataset
ChIP T-47D_HAEGIN2 GSE59935.NRF1.T-47D_HAEGIN2 183 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 200 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 207 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 122 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 155 bp overlap
PAX5 1 dataset
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 127 bp overlap
PCBP1 1 dataset
ChIP K-562 ENCSR052PTN.PCBP1.K-562 167 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 183 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 153 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 207 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 205 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 177 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 194 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 186 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 148 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 132 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 147 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 136 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 133 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 115 bp overlap
SIX5 7 datasets
ChIP GM12878 ENCSR000BJE.SIX5.GM12878 179 bp overlap
ChIP H1 ENCFF942SOJ 207 bp overlap
ChIP K-562 ENCSR000BGX.SIX5.K-562 164 bp overlap
ChIP K-562 ENCSR000BNW.SIX5.K-562 142 bp overlap
ChIP K562 ENCFF472MWE 190 bp overlap
ChIP K562 ENCFF637NIL 189 bp overlap
ChIP WA01 ENCSR000BIQ.SIX5.WA01 193 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 57 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 92 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 138 bp overlap
SUZ12 1 dataset
ChIP K-562 ENCSR412CTM.SUZ12.K-562 117 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 204 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 170 bp overlap
THAP11 1 dataset
ChIP HEK293 GSE138205.THAP11.HEK293 207 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 191 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 97 bp overlap
YY1 1 dataset
ChIP HEK293T_control GSE128106.YY1.HEK293T_control 207 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 207 bp overlap
ChIP K562 ENCFF427SDV 207 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 207 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 207 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 207 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 145 bp overlap
ZNF143 15 datasets
ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 207 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 146 bp overlap
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 188 bp overlap
ChIP HEK293T GSE39263.ZNF143.HEK293T 207 bp overlap
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 185 bp overlap
ChIP K-562 GSE39263.ZNF143.K-562 207 bp overlap
ChIP K-562 ENCSR000EGP.ZNF143.K-562 190 bp overlap
ChIP K562 ENCFF554TVF 207 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 207 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 207 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 207 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 207 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 207 bp overlap
ChIP WTC11 ENCFF249JUK 207 bp overlap
ChIP WTC11 ENCFF249JUK 188 bp overlap