chr5 : 150,299,594 – 150,300,178
584 bp 63 TFs 1 linked gene
This 584 bp open chromatin element is linked to ARSI and is bound by 63 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ARSI 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:150,294,594 – 150,305,178
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 490 bp overlap
ARNT 1 dataset
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 84 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 223 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 236 bp overlap
BRD4 5 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 123 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 169 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 115 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 175 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 141 bp overlap
CDK7 1 dataset
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 311 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 75 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 165 bp overlap
CTCF 2 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 233 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 166 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 71 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 264 bp overlap
EP300 1 dataset
ChIP A549 ENCFF960ZEI 66 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 466 bp overlap
FOSL1 2 datasets
ChIP BT-549 GSE46166.FOSL1.BT-549 295 bp overlap
ChIP BT-549 GSE112961.FOSL1.BT-549 197 bp overlap
FOXA1 5 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 147 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 192 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 340 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 285 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 346 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 538 bp overlap
ChIP DE DE-FOXA2-2 462 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 286 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 197 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 77 bp overlap
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 389 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 472 bp overlap
ChIP DE DE-GATA6-2 376 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 388 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 299 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 232 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 411 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 343 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 324 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 393 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF238LYK 377 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 480 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 333 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 264 bp overlap
IRF1 6 datasets
ChIP AsPC-1 GSE141606.IRF1.AsPC-1 178 bp overlap
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 233 bp overlap
ChIP AsPC-1_ZBED2-cDNA GSE141606.IRF1.AsPC-1_ZBED2-cDNA 168 bp overlap
ChIP K-562 ENCSR854MCV.IRF1.K-562 370 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 197 bp overlap
ChIP K562 ENCFF277KTJ 362 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 584 bp overlap
JUN 5 datasets
ChIP BT-549 GSE46166.JUN.BT-549 239 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 218 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 341 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 295 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 325 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 166 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 57 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 84 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 318 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 302 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 446 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 119 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 211 bp overlap
NEUROD1 2 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 477 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 227 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 51 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 392 bp overlap
POLR2A 1 dataset
ChIP esophagus muscularis mucosa ENCFF791ZXN 94 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 394 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 55 bp overlap
ChIP K562 ENCFF248CGR 150 bp overlap
ChIP K562 ENCFF957ORK 106 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 68 bp overlap
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 207 bp overlap
RELA 2 datasets
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 301 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 450 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 478 bp overlap
RUNX1 1 dataset
ChIP MCF-10A GSE129314.RUNX1.MCF-10A 165 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 384 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 370 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 310 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 310 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 206 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 131 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 421 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 433 bp overlap
SMARCA4 2 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 193 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SMARCB1 3 datasets
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 209 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 174 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 208 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 194 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 149 bp overlap
SMC1 1 dataset
ChIP IMR-90_G GSE118494.SMC1.IMR-90_G 139 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 226 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 262 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 262 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 239 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 559 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 225 bp overlap
TAF7 1 dataset
ChIP K-562 ENCSR000BNM.TAF7.K-562 108 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 234 bp overlap
TBP 1 dataset
ChIP K-562 ENCSR000EHA.TBP.K-562 85 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 218 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 336 bp overlap
TEAD4 2 datasets
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 312 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 332 bp overlap
USF2 1 dataset
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 140 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 364 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 301 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 95 bp overlap
ZNF24 6 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 112 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 149 bp overlap
ChIP K-562 ENCSR385AHH.ZNF24.K-562 166 bp overlap
ChIP K562 ENCFF615YYW 138 bp overlap
ChIP K562 ENCFF781QQQ 192 bp overlap
ChIP K562 ENCFF877JCX 188 bp overlap
ZNF629 1 dataset
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 109 bp overlap
ZNF664 1 dataset
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 131 bp overlap
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