chr5 : 149,273,332 149,274,284
952 bp 77 TFs 5 linked genes
This 952 bp open chromatin element is linked to 5 target genes and is bound by 77 transcription factors.
Linked Genes
5 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
AFAP1L1 1.5 kb Proximal Proximity
GRPEL2 71.6 kb Distal Multiome
PCYOX1L 84.2 kb Distal Multiome
CSNK1A1 277.6 kb Distal Multiome
ARHGEF37 278.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:149,268,332 – 149,279,284
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 214 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 345 bp overlap
BCL6 2 datasets
Motif DE_36h DE_36h-BCL6_MA0463.3 13 bp overlap
Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap
BCL6B 3 datasets
Motif DE_36h DE_36h-BCL6B_MA0731.1 17 bp overlap
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 420 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 189 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 190 bp overlap
CCAR2 1 dataset
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 184 bp overlap
CREB1 1 dataset
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 194 bp overlap
E4F1 3 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 292 bp overlap
ChIP K562 ENCFF622HMZ 405 bp overlap
ChIP K562 ENCFF622HMZ 205 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 425 bp overlap
EHF 2 datasets
ChIP RWPE-1 GSE114241.EHF.RWPE-1 352 bp overlap
ChIP primary-bronchial-epithelial GSE85401.EHF.primary-bronchial-epithelial 153 bp overlap
ELF1 12 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 366 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 232 bp overlap
ChIP HepG2 ENCFF367ZWV 180 bp overlap
ChIP HepG2 ENCFF838BCU 233 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 287 bp overlap
ChIP K-562 ENCSR502OEK.ELF1.K-562 277 bp overlap
ChIP K562 ENCFF457KVR 384 bp overlap
ChIP K562 ENCFF496AKI 120 bp overlap
ChIP K562 ENCFF886KFV 419 bp overlap
ChIP K562 ENCFF886KFV 181 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 216 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.ELF1.SK-N-MC_SHGFP_96H 179 bp overlap
ELF3 4 datasets
ChIP HepG2 ENCFF633ULY 298 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 344 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 450 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 417 bp overlap
ELF4 1 dataset
ChIP K-562 ENCSR638QHV.ELF4.K-562 225 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 173 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 234 bp overlap
ChIP hESC GSE26097.EOMES.hESC 270 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 221 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 180 bp overlap
EZH2 1 dataset
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 256 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 500 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 836 bp overlap
ChIP DE DE-FOXA2-2 792 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 613 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 258 bp overlap
ChIP DE DE-GATA4-2 329 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 337 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 473 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 736 bp overlap
ChIP DE DE-GATA6-2 328 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 294 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 655 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 322 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 265 bp overlap
ChIP foregut GSE117136.GATA6.foregut 279 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 276 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 396 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 222 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 337 bp overlap
ChIP K562 ENCFF348IBL 139 bp overlap
IKZF2 3 datasets
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 196 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 103 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 166 bp overlap
MAFF 2 datasets
ChIP HepG2 ENCFF452YUT 202 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 127 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 255 bp overlap
ChIP K562 ENCFF455EEO 291 bp overlap
MAFK 7 datasets
ChIP A549 ENCFF371EPR 302 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF743ZOF 76 bp overlap
ChIP HepG2 ENCFF767LDG 186 bp overlap
ChIP IMR-90 ENCFF336DHZ 191 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 131 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 99 bp overlap
MED1 2 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 215 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 237 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 183 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 456 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 67 bp overlap
NR2C1 2 datasets
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
Motif DE_48h DE_48h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
Motif DE_48h DE_48h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_36h DE_36h-NR2F1_MA1538.1 15 bp overlap
NR2F6 1 dataset
Motif DE_36h DE_36h-NR2F6_MA1539.1 15 bp overlap
Nr1H2 2 datasets
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_48h DE_48h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_48h DE_48h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_48h DE_48h-Nr1h3_MA2337.1 6 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 507 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 243 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 287 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF044PYR 296 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 496 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 312 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 283 bp overlap
RBPJ 2 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 491 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 229 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 132 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 398 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 320 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 125 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 596 bp overlap
Stat5b 2 datasets
Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap
Motif DE_48h DE_48h-Stat5b_MA1625.2 9 bp overlap
Stat6 3 datasets
Motif DE_36h DE_36h-Stat6_MA0520.2 10 bp overlap
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 195 bp overlap
TFAP2A 1 dataset
Motif DE_48h DE_48h-TFAP2A_MA0810.2 11 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 242 bp overlap
ZBTB40 4 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 357 bp overlap
ChIP K-562 ENCSR158RYZ.ZBTB40.K-562 240 bp overlap
ChIP K562 ENCFF337GJB 446 bp overlap
ChIP K562 ENCFF521DSV 360 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 441 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 363 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 158 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 229 bp overlap
ChIP K562 ENCFF838QCD 139 bp overlap
ZNF324 2 datasets
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
Motif DE_48h DE_48h-ZNF324_MA1977.2 14 bp overlap
ZNF454 2 datasets
Motif DE_36h DE_36h-ZNF454_MA1712.2 17 bp overlap
Motif DE_48h DE_48h-ZNF454_MA1712.2 17 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 217 bp overlap
ZNF530 2 datasets
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
Motif DE_48h DE_48h-ZNF530_MA1981.2 14 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 272 bp overlap
ZNF680 1 dataset
Motif DE_48h DE_48h-ZNF680_MA1729.2 11 bp overlap
ZNF770 2 datasets
ChIP HEK293 GSE76494.ZNF770.HEK293 174 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 316 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 148 bp overlap