chr5 : 148,685,577 148,686,199
622 bp 72 TFs 0 linked genes
This 622 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:148,680,577 – 148,691,199
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 143 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 109 bp overlap
ChIP VCaP GSE148358.AR.VCaP 210 bp overlap
ATF3 1 dataset
ChIP liver ENCSR480LIS.ATF3.liver 178 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 622 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 188 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 243 bp overlap
BNC2 3 datasets
ChIP SK-N-SH ENCFF174EMC 382 bp overlap
ChIP SK-N-SH ENCFF174EMC 425 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 420 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 333 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 487 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 163 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 372 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 117 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 318 bp overlap
ESR1 1 dataset
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 401 bp overlap
ESRRG 2 datasets
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 217 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 584 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_72h DE_72h-EWSR1-FLI1_MA0149.1 18 bp overlap
FOXA1 5 datasets
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 143 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 195 bp overlap
ChIP liver ENCFF749ERP 218 bp overlap
ChIP liver ENCFF749ERP 345 bp overlap
ChIP liver ERP002306.FOXA1.liver 164 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 212 bp overlap
ChIP DE DE-FOXA2-1 368 bp overlap
ChIP DE DE-FOXA2-2 426 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 174 bp overlap
GATA1 4 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 67 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 203 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 219 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 162 bp overlap
GATA2 11 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 262 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 271 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 271 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 219 bp overlap
ChIP SH-SY5Y ENCFF485YIB 315 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 529 bp overlap
ChIP SK-N-SH ENCFF764OZD 230 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 403 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 229 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 339 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 272 bp overlap
GATA3 10 datasets
ChIP BE2C GSE65664.GATA3.BE2C 258 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 201 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 193 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 167 bp overlap
ChIP SH-SY5Y ENCFF475HYF 300 bp overlap
ChIP SH-SY5Y ENCFF475HYF 481 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 419 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 214 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 244 bp overlap
ChIP SK-N-SH ENCFF040SSB 218 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 465 bp overlap
ChIP DE DE-GATA4-2 521 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 224 bp overlap
ChIP foregut GSE117136.GATA4.foregut 443 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 262 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 474 bp overlap
ChIP DE DE-GATA6-2 482 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 271 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 509 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 362 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 262 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 127 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 455 bp overlap
ChIP foregut GSE117136.GATA6.foregut 447 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 343 bp overlap
GLIS3 2 datasets
ChIP SK-N-SH ENCFF370MHZ 252 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 185 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 226 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 265 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 140 bp overlap
ChIP liver ENCFF449HPV 271 bp overlap
ChIP liver ERP002306.HNF4A.liver 130 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 91 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 261 bp overlap
ISL1 3 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 215 bp overlap
ChIP SK-N-SH ENCFF285GEQ 341 bp overlap
ChIP SK-N-SH ENCFF285GEQ 480 bp overlap
JUND 2 datasets
ChIP liver ENCFF007WWT 261 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 170 bp overlap
KDM1A 4 datasets
ChIP K-562 GSE117944.KDM1A.K-562 71 bp overlap
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 160 bp overlap
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 172 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 347 bp overlap
KLF9 1 dataset
Motif DE_60h DE_60h-KLF9_MA1107.3 11 bp overlap
LHX6 2 datasets
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 264 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 239 bp overlap
MAX 2 datasets
ChIP liver ENCFF584QGB 340 bp overlap
ChIP liver ENCSR521IID.MAX.liver 273 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 362 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 218 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 169 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 239 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 443 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
RAD21 4 datasets
ChIP SK-N-SH ENCFF747MAS 193 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 214 bp overlap
ChIP liver ENCFF485PAC 305 bp overlap
ChIP liver ENCFF522JHE 94 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 192 bp overlap
ChIP K562 ENCFF248CGR 195 bp overlap
ChIP K562 ENCFF957ORK 195 bp overlap
RCOR1 3 datasets
ChIP SK-N-SH ENCFF518EXB 113 bp overlap
ChIP SK-N-SH ENCFF518EXB 365 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 474 bp overlap
REST 4 datasets
ChIP SK-N-SH ENCFF861MKH 186 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 103 bp overlap
ChIP liver ENCFF240FWT 319 bp overlap
ChIP liver ENCSR867WPH.REST.liver 224 bp overlap
RFX5 2 datasets
ChIP SK-N-SH ENCFF755HLO 169 bp overlap
ChIP SK-N-SH ENCFF755HLO 341 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 441 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 311 bp overlap
ChIP liver ENCFF807CIA 194 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 466 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 405 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 274 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 154 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 358 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 257 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 595 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 204 bp overlap
SP1 3 datasets
ChIP liver ENCFF597LFJ 199 bp overlap
ChIP liver ENCFF597LFJ 485 bp overlap
ChIP liver ENCFF769YSM 366 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 431 bp overlap
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 194 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 315 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 326 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCFF754TJT 376 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 213 bp overlap
TFAP2B 2 datasets
Motif DE_60h DE_60h-TFAP2B_MA0813.1 13 bp overlap
ChIP SK-N-SH ENCFF869XXQ 310 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 291 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 381 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 494 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 234 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 234 bp overlap
YY1 2 datasets
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 209 bp overlap
ChIP liver ENCFF400MBC 399 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 195 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 122 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 122 bp overlap
ChIP K562 ENCFF361LXT 174 bp overlap
ZNF24 2 datasets
Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
ZNF317 2 datasets
Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap
Motif DE_72h DE_72h-ZNF317_MA1593.2 8 bp overlap
ZNF549 2 datasets
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
Motif DE_72h DE_72h-ZNF549_MA1728.2 8 bp overlap
Zfp335 2 datasets
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap