chr5 : 143,032,451 143,032,890
439 bp 63 TFs 0 linked genes
This 439 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:143,027,451 – 143,037,890
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 107 bp overlap
ASCL1 2 datasets
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 184 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 99 bp overlap
BRD4 8 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 127 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 373 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 261 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 439 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 285 bp overlap
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 176 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 159 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 185 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 439 bp overlap
CEBPB 1 dataset
ChIP HCT116 ENCFF097OLY 203 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCFF669KMB 176 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 354 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 235 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 263 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 239 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 349 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 373 bp overlap
CTCF 8 datasets
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 150 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 139 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 135 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 245 bp overlap
ChIP islet ERP004003.CTCF.islet 247 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 260 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 312 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 413 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 225 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 295 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 295 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 305 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 144 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 113 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 193 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 439 bp overlap
ChIP DE DE-FOXA2-2 439 bp overlap
GATA2 6 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 56 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 56 bp overlap
ChIP SH-SY5Y ENCFF485YIB 205 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 259 bp overlap
ChIP SK-N-SH ENCFF764OZD 276 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 307 bp overlap
GATA3 6 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 392 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 426 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 219 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 264 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 320 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 400 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 439 bp overlap
ChIP DE DE-GATA4-2 439 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 439 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 377 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 439 bp overlap
ChIP DE DE-GATA6-2 439 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 411 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 439 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 276 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 408 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 439 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 411 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 280 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 434 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 439 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 81 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 439 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 412 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 205 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 273 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 121 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 156 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 249 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 277 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 304 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 348 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 283 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 208 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 163 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 259 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 419 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 146 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 198 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 171 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 191 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 138 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 130 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 120 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 157 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 439 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 388 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 412 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 251 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 365 bp overlap
NFE2 4 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 148 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 118 bp overlap
ChIP K562 ENCFF047YKA 248 bp overlap
ChIP K562 ENCFF163BSI 179 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 348 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 304 bp overlap
OTX2 2 datasets
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 370 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 336 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 91 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 80 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 184 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 439 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 439 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 439 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 86 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 181 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 179 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 400 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 196 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 221 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 278 bp overlap
SATB1 2 datasets
ChIP MCF-10A_N-term_CUT1 GSE123292.SATB1.MCF-10A_N-term_CUT1 291 bp overlap
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 439 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 439 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 314 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 358 bp overlap
SNAI2 3 datasets
ChIP RD GSE137168.SNAI2.RD 173 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 158 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 151 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 280 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 410 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 421 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 325 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 325 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 314 bp overlap