chr5 : 123,138,751 123,139,182
431 bp 94 TFs 0 linked genes
This 431 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:123,133,751 – 123,144,182
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 154 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 105 bp overlap
ARNT2 1 dataset
Motif DE_36h DE_36h-ARNT2_MA1464.2 8 bp overlap
Arnt 1 dataset
Motif DE_36h DE_36h-Arnt_MA0004.1 6 bp overlap
Arntl 1 dataset
Motif DE_36h DE_36h-Arntl_MA0603.2 8 bp overlap
BARHL1 1 dataset
Motif DE_36h DE_36h-BARHL1_MA0877.4 6 bp overlap
BARHL2 1 dataset
Motif DE_36h DE_36h-BARHL2_MA0635.2 6 bp overlap
BARX2 3 datasets
Motif DE_36h DE_36h-BARX2_MA1471.2 9 bp overlap
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
BHLHE40 2 datasets
Motif DE_36h DE_36h-BHLHE40_MA0464.3 8 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 222 bp overlap
BHLHE41 1 dataset
Motif DE_36h DE_36h-BHLHE41_MA0636.1 10 bp overlap
CLOCK 1 dataset
Motif DE_36h DE_36h-CLOCK_MA0819.3 7 bp overlap
CTCF 4 datasets
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
ChIP endodermal cell ENCFF471YCZ 370 bp overlap
ChIP stomach ENCFF370OWL 343 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 175 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 251 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
DUX4 2 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Dmbx1 1 dataset
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
Dux 1 dataset
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 169 bp overlap
Elf5 1 dataset
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
FLI1 1 dataset
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 248 bp overlap
FOS 1 dataset
Motif DE_36h DE_36h-FOS_MA0476.2 8 bp overlap
FOXA1 11 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 76 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 60 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 59 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 117 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 135 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 213 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 71 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 120 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 57 bp overlap
ChIP LNCaP_M253K GSE133386.FOXA1.LNCaP_M253K 85 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 61 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 310 bp overlap
ChIP DE DE-FOXA2-2 291 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 256 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 135 bp overlap
ChIP DE DE-GATA4-1 431 bp overlap
ChIP DE DE-GATA4-2 431 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 353 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 149 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 410 bp overlap
ChIP DE DE-GATA6-2 431 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 397 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 431 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 413 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 401 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 394 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 349 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 311 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
HES1 1 dataset
Motif DE_36h DE_36h-HES1_MA1099.3 8 bp overlap
HEY2 1 dataset
Motif DE_36h DE_36h-HEY2_MA0649.2 9 bp overlap
HOXB13 4 datasets
Motif DE_36h DE_36h-HOXB13_MA0901.3 9 bp overlap
Motif DE_48h DE_48h-HOXB13_MA0901.3 9 bp overlap
Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 59 bp overlap
HOXC13 3 datasets
Motif DE_36h DE_36h-HOXC13_MA0907.2 9 bp overlap
Motif DE_48h DE_48h-HOXC13_MA0907.2 9 bp overlap
Motif DE_60h DE_60h-HOXC13_MA0907.2 9 bp overlap
Hic1 1 dataset
Motif DE_60h DE_60h-Hic1_MA0739.2 8 bp overlap
IKZF2 1 dataset
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 371 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 242 bp overlap
Isl1 2 datasets
Motif DE_36h DE_36h-Isl1_MA1608.2 7 bp overlap
Motif DE_48h DE_48h-Isl1_MA1608.2 7 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 263 bp overlap
Jun 1 dataset
Motif DE_36h DE_36h-Jun_MA0489.3 8 bp overlap
KLF5 2 datasets
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 242 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 269 bp overlap
MAX 1 dataset
Motif DE_36h DE_36h-MAX_MA0058.4 6 bp overlap
MLXIPL 1 dataset
Motif DE_36h DE_36h-MLXIPL_MA0664.2 8 bp overlap
MNT 1 dataset
Motif DE_36h DE_36h-MNT_MA0825.2 6 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 206 bp overlap
Mlxip 1 dataset
Motif DE_36h DE_36h-Mlxip_MA0622.2 6 bp overlap
NFKB1 1 dataset
Motif DE_36h DE_36h-NFKB1_MA0105.4 13 bp overlap
NFKB2 1 dataset
Motif DE_36h DE_36h-NFKB2_MA0778.2 11 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 213 bp overlap
PHOX2A 1 dataset
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 389 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 313 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 382 bp overlap
REL 1 dataset
Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
SMAD2 1 dataset
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 364 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 319 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 431 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 431 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 373 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 431 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 226 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 204 bp overlap
TBP 3 datasets
Motif DE_36h DE_36h-TBP_MA0108.3 7 bp overlap
Motif DE_48h DE_48h-TBP_MA0108.3 7 bp overlap
Motif DE_60h DE_60h-TBP_MA0108.3 7 bp overlap
TFAP2A 1 dataset
Motif DE_60h DE_60h-TFAP2A_MA0872.1 13 bp overlap
TFE3 1 dataset
Motif DE_36h DE_36h-TFE3_MA0831.3 10 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 71 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 57 bp overlap
VENTX 3 datasets
Motif DE_36h DE_36h-VENTX_MA0724.1 9 bp overlap
Motif DE_48h DE_48h-VENTX_MA0724.1 9 bp overlap
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 425 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZIC1 2 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 274 bp overlap
ZNF189 3 datasets
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 232 bp overlap
ZNF274 2 datasets
Motif DE_36h DE_36h-ZNF274_MA1592.2 12 bp overlap
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap
ZNF282 1 dataset
Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap
ZNF341 3 datasets
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 345 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 129 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 202 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 290 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 155 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 408 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 272 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 431 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 269 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 345 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 283 bp overlap
ZNF701 2 datasets
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
ZNF740 1 dataset
Motif DE_36h DE_36h-ZNF740_MA0753.3 10 bp overlap
ZNF816 1 dataset
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 269 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 327 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap