chr5 : 3,606,530 – 3,606,746
216 bp 67 TFs 1 linked gene
This 216 bp open chromatin element is linked to ENSG00000259603 and is bound by 67 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000259603 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:3,601,530 – 3,611,746
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 216 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 103 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 216 bp overlap
ChIP H1 ENCFF399KAM 216 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 216 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 115 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 216 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 216 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 216 bp overlap
BRD4 5 datasets
ChIP 402-91 GSE111253.BRD4.402-91 216 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 216 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 130 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 216 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 214 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 193 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 205 bp overlap
CTCF 1 dataset
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 216 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 188 bp overlap
E2F6 1 dataset
ChIP H1 ENCFF785DWK 134 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 98 bp overlap
ESR1 7 datasets
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 216 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 121 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 216 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 117 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 216 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 132 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 62 bp overlap
EZH2 14 datasets
ChIP GM23338 ENCFF613YON 125 bp overlap
ChIP H1 ENCFF232NZA 216 bp overlap
ChIP H1 ENCFF232NZA 216 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 216 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 216 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 216 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 165 bp overlap
ChIP hepatocyte ENCFF552DZB 142 bp overlap
ChIP hepatocyte ENCFF552DZB 216 bp overlap
ChIP neural progenitor cell ENCFF472NFV 216 bp overlap
ChIP neural progenitor cell ENCFF472NFV 216 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 216 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 77 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 53 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 194 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 138 bp overlap
GATA6 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 184 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 216 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 201 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 216 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 216 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 216 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 60 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 216 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 137 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 183 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 50 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 156 bp overlap
KDM1A 3 datasets
ChIP H1 ENCFF696SGD 178 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 216 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 216 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 216 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 216 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 122 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 216 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 216 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 72 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 216 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 192 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 216 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 92 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 216 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 216 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 176 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 216 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 216 bp overlap
POLR2A 2 datasets
ChIP PFSK-1 ENCFF576NIT 216 bp overlap
ChIP PFSK-1 ENCFF576NIT 146 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 72 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 155 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 184 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 203 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 216 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 89 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 133 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 216 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 216 bp overlap
RELA 2 datasets
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 176 bp overlap
ChIP HEK293_TNF-30min GSE75562.RELA.HEK293_TNF-30min 116 bp overlap
RNF2 2 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 216 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 216 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 216 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 216 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 216 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 133 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 216 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 216 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 183 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 150 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 153 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 154 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 216 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 164 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 216 bp overlap
SP1 2 datasets
ChIP WTC11 ENCFF688PEU 216 bp overlap
ChIP WTC11 ENCFF688PEU 148 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 216 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 216 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 127 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 216 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 216 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 216 bp overlap
SUZ12 5 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 216 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 216 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 145 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 134 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 216 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 179 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 216 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 172 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 62 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 98 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 216 bp overlap
USF2 1 dataset
ChIP K-562 GSE111469.USF2.K-562 164 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 192 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 98 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 124 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 145 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 166 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 143 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 59 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 117 bp overlap
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