chr4 : 174,152,594 – 174,153,058

464 bp 77 TFs 0 linked genes

This 464 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

77 transcription factors

ARID1A 1 dataset

ChIP NGP GSE134626.ARID1A.NGP 283 bp overlap

ATRX 1 dataset

ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 290 bp overlap

BRD4 2 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 352 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 464 bp overlap

Bcl11B 2 datasets

Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap

Motif ES_0h ES_0h-Bcl11B_MA1989.2 9 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 433 bp overlap

Crx 1 dataset

Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap

ELF1 2 datasets

ChIP K-562 ENCSR000BMD.ELF1.K-562 150 bp overlap

ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 265 bp overlap

ELF3 1 dataset

ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 287 bp overlap

ERF::FOXI1 2 datasets

Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap

Motif ES_0h ES_0h-ERFFOXI1_MA1935.2 10 bp overlap

ERF::HOXB13 1 dataset

Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap

ETV1 2 datasets

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 2 datasets

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap

EZH2 3 datasets

ChIP DND41 ENCSR000ASW.EZH2.DND41 199 bp overlap

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 196 bp overlap

ChIP SF8628 GSE94834.EZH2.SF8628 464 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FLI1 5 datasets

ChIP A-673 GSE99959.FLI1.A-673 241 bp overlap

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 305 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 271 bp overlap

ChIP A-673_D11 GSE129155.FLI1.A-673_D11 211 bp overlap

ChIP A-673_D14 GSE129155.FLI1.A-673_D14 464 bp overlap

GATA3 3 datasets

ChIP BE2C GSE65664.GATA3.BE2C 90 bp overlap

ChIP SH-SY5Y ENCFF475HYF 169 bp overlap

ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 126 bp overlap

GRHL2 1 dataset

ChIP T-47D GSE99680.GRHL2.T-47D 234 bp overlap

GSC 1 dataset

Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap

HDAC2 1 dataset

ChIP K-562 ENCSR893WSB.HDAC2.K-562 170 bp overlap

HNF4A 1 dataset

Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap

IKZF1 4 datasets

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap

ChIP K-562 ENCSR395HWC.IKZF1.K-562 289 bp overlap

ChIP K562 ENCFF348IBL 342 bp overlap

IKZF2 3 datasets

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 2 datasets

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap

KLF6 1 dataset

Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap

MEF2A 1 dataset

Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 464 bp overlap

MYC 2 datasets

ChIP NB69 GSE138295.MYC.NB69 384 bp overlap

ChIP SK-N-AS GSE138295.MYC.SK-N-AS 267 bp overlap

MYCN 2 datasets

ChIP Kelly GSE94822.MYCN.Kelly 171 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 261 bp overlap

NFIA 2 datasets

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap

NFIX 2 datasets

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap

NFYB 1 dataset

Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap

NKX6-3 1 dataset

Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap

NR1H2::RXRA 1 dataset

Motif DE_12h DE_12h-NR1H2RXRA_MA0115.1 17 bp overlap

NR1H4::RXRA 1 dataset

Motif DE_12h DE_12h-NR1H4RXRA_MA1146.2 13 bp overlap

NR2F1 1 dataset

Motif DE_12h DE_12h-NR2F1_MA1538.1 15 bp overlap

NR2F2 1 dataset

ChIP liver ENCSR168SMX.NR2F2.liver 258 bp overlap

NR2F6 1 dataset

Motif DE_12h DE_12h-NR2F6_MA1539.1 15 bp overlap

NR4A2::RXRA 1 dataset

Motif DE_12h DE_12h-NR4A2RXRA_MA1147.2 13 bp overlap

NUTM1 1 dataset

ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 464 bp overlap

OTX1 1 dataset

Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 294 bp overlap

PITX1 1 dataset

Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap

PITX3 2 datasets

Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 464 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 147 bp overlap

PRDM15 1 dataset

ChIP WTC11 ENCFF108TMF 291 bp overlap

PRDM6 2 datasets

ChIP HEK293 ENCFF283AJL 315 bp overlap

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 229 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 185 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

Prdm14 1 dataset

Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap

RARA::RXRA 1 dataset

Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

RHOXF1 1 dataset

Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap

Rhox11 2 datasets

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap

SMARCA4 1 dataset

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 340 bp overlap

SMARCC1 2 datasets

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 361 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 458 bp overlap

SMARCE1 1 dataset

ChIP K-562 ENCSR157TCS.SMARCE1.K-562 203 bp overlap

SP9 1 dataset

Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap

SS18 1 dataset

ChIP Aska-SS GSE108025.SS18.Aska-SS 257 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 166 bp overlap

TAF1 1 dataset

ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 134 bp overlap

TBP 1 dataset

ChIP H1 ENCFF859IIO 350 bp overlap

TCF7L1 1 dataset

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

TSHZ2 2 datasets

ChIP SK-N-SH ENCFF182EBB 321 bp overlap

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 179 bp overlap

ZFP3 1 dataset

ChIP SK-N-SH ENCFF981MBE 389 bp overlap

ZNF175 2 datasets

Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap

Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap

ZNF182 1 dataset

ChIP HEK293T GSE78099.ZNF182.HEK293T 143 bp overlap

ZNF213 1 dataset

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

ZNF214 1 dataset

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

ZNF335 2 datasets

ChIP HEK293 ENCFF784SLD 157 bp overlap

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 150 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 320 bp overlap

ZNF616 1 dataset

ChIP HEK293T GSE78099.ZNF616.HEK293T 243 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

ZNF682 1 dataset

Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap