chr1 : 84,748,227 – 84,749,377

1,150 bp 77 TFs 0 linked genes

This 1.1 kb open chromatin element has no linked target genes and is bound by 77 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

77 transcription factors

AR 1 dataset

ChIP LNCaP_Veh GSE125245.AR.LNCaP_Veh 168 bp overlap

ATF1 1 dataset

ChIP K-562 ENCSR091GVJ.ATF1.K-562 390 bp overlap

BRD2 1 dataset

ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 129 bp overlap

CEBPB 1 dataset

ChIP K-562 ENCSR000BRQ.CEBPB.K-562 131 bp overlap

CTCF 3 datasets

ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 75 bp overlap

ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 149 bp overlap

ChIP WI38 ENCFF841AXJ 216 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 234 bp overlap

E2F6 1 dataset

Motif DE_60h DE_60h-E2F6_MA0471.3 8 bp overlap

E2F7 1 dataset

Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap

EHF 1 dataset

Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 354 bp overlap

ESR1 2 datasets

ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 103 bp overlap

ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 354 bp overlap

ESR1_Y537S 1 dataset

ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 160 bp overlap

ESRRA 1 dataset

ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 100 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 100 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 209 bp overlap

EZH2 2 datasets

ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 136 bp overlap

ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 369 bp overlap

Elf5 1 dataset

Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap

FOXA1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 260 bp overlap

FOXA2 3 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 212 bp overlap

ChIP DE DE-FOXA2-1 951 bp overlap

ChIP DE DE-FOXA2-2 571 bp overlap

GATA1::TAL1 1 dataset

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA2 1 dataset

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 7 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 208 bp overlap

ChIP DE DE-GATA4-1 1150 bp overlap

ChIP DE DE-GATA4-2 756 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 439 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 582 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 439 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 13 datasets

ChIP DE DE-GATA6-1 1150 bp overlap

ChIP DE DE-GATA6-2 753 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 598 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 372 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 380 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 334 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 473 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 605 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 377 bp overlap

ChIP foregut GSE117136.GATA6.foregut 551 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 381 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 340 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 102 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HAND2 1 dataset

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

HSF1 1 dataset

Motif DE_60h DE_60h-HSF1_MA0486.2 13 bp overlap

HSF2 1 dataset

Motif DE_60h DE_60h-HSF2_MA0770.1 13 bp overlap

HSF4 1 dataset

Motif DE_60h DE_60h-HSF4_MA0771.1 13 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap

IKZF2 1 dataset

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

JUN 2 datasets

ChIP Karpas-299 GSE151413.JUN.Karpas-299 303 bp overlap

ChIP Karpas-299 GSE151413.JUN.Karpas-299 55 bp overlap

KDM4C 1 dataset

ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 78 bp overlap

KLF4 1 dataset

ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 165 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MORC2 1 dataset

ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 148 bp overlap

POLR2A 1 dataset

ChIP stomach ENCFF820WZN 345 bp overlap

POU5F1 1 dataset

ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 62 bp overlap

Pparg::Rxra 1 dataset

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

RBPJ 1 dataset

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

RELA 1 dataset

ChIP HeLa-B2_TA_TNFA GSE24518.RELA.HeLa-B2_TA_TNFA 165 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 537 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 216 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 199 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 188 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 210 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 338 bp overlap

SP2 1 dataset

Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap

SPIB 1 dataset

Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap

STAT1 3 datasets

Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap

ChIP FaDu_BB608 GSE78212.STAT1.FaDu_BB608 56 bp overlap

ChIP FaDu_DMSO GSE78212.STAT1.FaDu_DMSO 58 bp overlap

STAT3 1 dataset

Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap

STAT5B 2 datasets

ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 67 bp overlap

ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 210 bp overlap

Stat4 1 dataset

Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap

Stat5a 1 dataset

Motif DE_60h DE_60h-Stat5a_MA1624.2 9 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_60h DE_60h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat5b 1 dataset

Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 233 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 201 bp overlap

TEAD1 1 dataset

Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap

TEAD4 1 dataset

Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

TWIST1 1 dataset

Motif DE_60h DE_60h-TWIST1_MA1123.3 8 bp overlap

ZC3H8 1 dataset

ChIP HCT-116 GSE47938.ZC3H8.HCT-116 192 bp overlap

ZKSCAN5 1 dataset

Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF175 1 dataset

Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap

ZNF189 1 dataset

Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap

ZNF257 2 datasets

Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap

ZNF320 1 dataset

Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap

ZNF354C 1 dataset

Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap

ZNF418 1 dataset

Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap

ZNF479 1 dataset

ChIP HEK293T GSE78099.ZNF479.HEK293T 411 bp overlap

ZNF667 1 dataset

Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap

ZNF770 1 dataset

Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap

Zfp809 1 dataset

Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap