chr4 : 149,987,306 149,987,644
338 bp 76 TFs 0 linked genes
This 338 bp open chromatin element has no linked target genes and is bound by 76 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:149,982,306 – 149,992,644
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 201 bp overlap
BRD4 6 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 270 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 250 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 338 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 338 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 72 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 338 bp overlap
CDK7 1 dataset
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 91 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 282 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 273 bp overlap
EBF1 2 datasets
ChIP MUTUL GSE75503.EBF1.MUTUL 172 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 214 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 338 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 338 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 338 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 338 bp overlap
ERG 3 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 273 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 157 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 190 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 143 bp overlap
ETV1 2 datasets
ChIP K-562 ENCSR277DMR.ETV1.K-562 244 bp overlap
ChIP K562 ENCFF389WTI 302 bp overlap
FLI1 12 datasets
ChIP A-673 GSE99959.FLI1.A-673 334 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 313 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 292 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 275 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 320 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 315 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 144 bp overlap
ChIP SEM GSE117864.FLI1.SEM 166 bp overlap
ChIP SK-N-MC GSE61944.FLI1.SK-N-MC 320 bp overlap
ChIP SK-N-MC_SHFLI_48H GSE61944.FLI1.SK-N-MC_SHFLI_48H 192 bp overlap
ChIP SK-N-MC_SHGFP_48H GSE61944.FLI1.SK-N-MC_SHGFP_48H 229 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.FLI1.SK-N-MC_SHGFP_96H 259 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 249 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 101 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 162 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 191 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 174 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 227 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 211 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 266 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 261 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 338 bp overlap
HOXA9 1 dataset
ChIP SEM GSE38339.HOXA9.SEM 235 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 230 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 338 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 259 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR854MCV.IRF1.K-562 325 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 338 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 244 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 265 bp overlap
MED1 8 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 248 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 253 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 285 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 120 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 248 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 79 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 146 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 288 bp overlap
MEIS1 3 datasets
ChIP A-673 GSE109477.MEIS1.A-673 231 bp overlap
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 304 bp overlap
ChIP SEM GSE38339.MEIS1.SEM 338 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 267 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 223 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 331 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 319 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 338 bp overlap
MYC 2 datasets
ChIP NB69 GSE138295.MYC.NB69 94 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 338 bp overlap
MYCN 7 datasets
ChIP 22Rv1_intact GSE117304.MYCN.22Rv1_intact 196 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 221 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 216 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 314 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 271 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 184 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 181 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 219 bp overlap
NFIC 5 datasets
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 161 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 326 bp overlap
ChIP K562 ENCFF167YID 303 bp overlap
ChIP SK-N-SH ENCFF965AKM 281 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 317 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
NOTCH1 1 dataset
ChIP GSC8-11_dasatinib GSE74557.NOTCH1.GSC8-11_dasatinib 323 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 300 bp overlap
ChIP K562 ENCFF286KMN 338 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 275 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 53 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 338 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 193 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 305 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 204 bp overlap
RBPJ 3 datasets
ChIP GIC GSE79734.RBPJ.GIC 287 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 305 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 338 bp overlap
RELA 3 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 196 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 161 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 163 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 173 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 177 bp overlap
SMARCA2 6 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 211 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 270 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 327 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 314 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 304 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCA2.SK-N-MC_shGFP 240 bp overlap
SMARCA4 14 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 98 bp overlap
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 94 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 216 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 305 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 338 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 248 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 338 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 178 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 314 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 333 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 200 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 324 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 205 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 120 bp overlap
SMARCC1 4 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 320 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 261 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 268 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 200 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 136 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 332 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 168 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 254 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 175 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 338 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 338 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 143 bp overlap
TOX 1 dataset
ChIP SK-N-SH ENCFF977TQV 301 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 236 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 236 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 338 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 217 bp overlap
TWIST1 3 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 338 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 207 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 338 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 146 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 117 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 250 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 210 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 148 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 177 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 296 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 101 bp overlap