chr4 : 132,737,202 132,737,685
483 bp 98 TFs 0 linked genes
This 483 bp open chromatin element has no linked target genes and is bound by 98 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:132,732,202 – 132,742,685
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 113 bp overlap
Bhlha15 2 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap
CTCF 77 datasets
ChIP A-549 ENCSR000DNA.CTCF.A-549 129 bp overlap
ChIP BE2C ENCFF757SRF 164 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 257 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_48h DE_48h-CTCF_MA1930.2 33 bp overlap
Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap
ChIP DND-41 ENCFF913MRA 317 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 160 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 100 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 120 bp overlap
ChIP H9 ENCFF152GTF 272 bp overlap
ChIP H9 ENCFF152GTF 197 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 264 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 226 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 167 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 306 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 236 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 220 bp overlap
ChIP HCT116 ENCFF003KHP 421 bp overlap
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 114 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 199 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 169 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 88 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 256 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 184 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 196 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 108 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 281 bp overlap
ChIP NPC GSE115407.CTCF.NPC 245 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 192 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 132 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 117 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 346 bp overlap
ChIP VCaP ENCFF858YQT 483 bp overlap
ChIP VCaP ENCFF858YQT 288 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 340 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 191 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 203 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 250 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 158 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 315 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 300 bp overlap
ChIP endodermal cell ENCFF471YCZ 316 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 172 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 305 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 123 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 223 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 127 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 328 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 317 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 121 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 179 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 169 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 220 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 157 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 207 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 201 bp overlap
ChIP keratinocyte ENCFF667ULX 325 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 275 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 188 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 265 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 441 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 234 bp overlap
ChIP neural progenitor cell ENCFF420RBO 212 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 339 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 174 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 157 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 366 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 445 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 257 bp overlap
DMRTA1 3 datasets
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_60h DE_60h-DMRTA1_MA1707.2 10 bp overlap
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 4 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 149 bp overlap
ESR1 2 datasets
ChIP MCF-7_IL1b_45m GSE67295.ESR1.MCF-7_IL1b_45m 174 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 258 bp overlap
EWSR1-FLI1 3 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
FEZF2 3 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Foxn1 2 datasets
Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap
Motif ES_0h ES_0h-Foxn1_MA1684.1 6 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 268 bp overlap
GCM1 2 datasets
Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap
Motif ES_0h ES_0h-GCM1_MA0646.2 10 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Hand1 3 datasets
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
Hand1::Tcf3 3 datasets
Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_48h DE_48h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif ES_0h ES_0h-Hand1Tcf3_MA0092.2 9 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
KLF13 4 datasets
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
Motif DE_48h DE_48h-KLF13_MA0657.2 17 bp overlap
Motif DE_60h DE_60h-KLF13_MA0657.2 17 bp overlap
Motif ES_0h ES_0h-KLF13_MA0657.2 17 bp overlap
MAFF 2 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYF5 2 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 133 bp overlap
NFIB 2 datasets
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NFKB1 1 dataset
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 101 bp overlap
NFYA 1 dataset
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
NFYC 1 dataset
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 178 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
PKNOX1 1 dataset
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 203 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 148 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 172 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 147 bp overlap
Ptf1A 4 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1620.2 8 bp overlap
RAD21 9 datasets
ChIP H1 ENCFF698EWO 126 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 158 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 135 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 178 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 244 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 264 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 177 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 127 bp overlap
RELB 3 datasets
Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap
Motif DE_60h DE_60h-RELB_MA1117.2 7 bp overlap
Motif ES_0h ES_0h-RELB_MA1117.2 7 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 159 bp overlap
RUNX3 2 datasets
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
Motif ES_0h ES_0h-RUNX3_MA0684.3 8 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 210 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SOX10 3 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 198 bp overlap
SOX4 3 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
STAT6 1 dataset
ChIP WTC11 ENCFF271RMR 412 bp overlap
Sox5 3 datasets
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Stat5a 2 datasets
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 165 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 136 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 155 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Tcf21 2 datasets
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 237 bp overlap
ZBTB12 2 datasets
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
Motif ES_0h ES_0h-ZBTB12_MA1649.2 7 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 438 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF354C 4 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF677 2 datasets
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap
ZNF680 2 datasets
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
Zic1::Zic2 2 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 2 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap