chr4 : 102,150,625 102,151,991
1,366 bp 102 TFs 0 linked genes
This 1.4 kb open chromatin element has no linked target genes and is bound by 102 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:102,145,625 – 102,156,991
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_60h DE_60h-ALX3_MA0634.2 6 bp overlap
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 226 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 516 bp overlap
ChIP NGP GSE134626.ARID1A.NGP 200 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 134 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 303 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 246 bp overlap
CTCF 1 dataset
ChIP suprapubic skin ENCFF198TWE 305 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 255 bp overlap
DRGX 1 dataset
Motif DE_60h DE_60h-DRGX_MA1481.2 6 bp overlap
Dmrt1 1 dataset
Motif DE_60h DE_60h-Dmrt1_MA1603.2 9 bp overlap
EGR1 1 dataset
ChIP liver ENCSR290ZOS.EGR1.liver 148 bp overlap
EMX1 1 dataset
Motif DE_60h DE_60h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_60h DE_60h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_60h DE_60h-EN1_MA0027.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 192 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 296 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 246 bp overlap
ESR1 35 datasets
ChIP MCF-7 GSE103023.ESR1.MCF-7 232 bp overlap
ChIP MCF-7 GSE117492.ESR1.MCF-7 245 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 292 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 226 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 161 bp overlap
ChIP MCF-7 GSE94023.ESR1.MCF-7 142 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 298 bp overlap
ChIP MCF-7_E2 GSE72249.ESR1.MCF-7_E2 274 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 174 bp overlap
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 259 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 143 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 282 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 151 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 231 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 210 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 155 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 167 bp overlap
ChIP MCF-7_E2_90min GSE109820.ESR1.MCF-7_E2_90min 174 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 108 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 282 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 200 bp overlap
ChIP MCF-7_estrogen GSE133941.ESR1.MCF-7_estrogen 248 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 358 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 293 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 225 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 279 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 360 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 385 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 300 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 236 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 187 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 293 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 297 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 119 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 219 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 356 bp overlap
ESR2 1 dataset
Motif DE_72h DE_72h-ESR2_MA0258.2 15 bp overlap
EVX1 1 dataset
Motif DE_60h DE_60h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_60h DE_60h-EVX2_MA0888.2 6 bp overlap
FOXA1 13 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 192 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 245 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 285 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 290 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 134 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 126 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 192 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 232 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 234 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 275 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 193 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 255 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 257 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 1366 bp overlap
ChIP DE DE-FOXA2-2 1366 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 191 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 263 bp overlap
ChIP SK-N-SH ENCFF764OZD 315 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 334 bp overlap
GATA3 10 datasets
ChIP MCF-7 GSE122847.GATA3.MCF-7 423 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 292 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 248 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 199 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 274 bp overlap
ChIP NGP GSE65664.GATA3.NGP 154 bp overlap
ChIP SH-SY5Y ENCFF475HYF 327 bp overlap
ChIP SH-SY5Y ENCFF475HYF 119 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 345 bp overlap
ChIP SK-N-SH ENCFF040SSB 248 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 561 bp overlap
ChIP DE DE-GATA4-1 619 bp overlap
ChIP DE DE-GATA4-2 1330 bp overlap
ChIP foregut GSE117136.GATA4.foregut 604 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 270 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 539 bp overlap
ChIP DE DE-GATA6-1 603 bp overlap
ChIP DE DE-GATA6-2 571 bp overlap
ChIP DE DE-GATA6-2 629 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 590 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 527 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 494 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 401 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 504 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 586 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 374 bp overlap
GRHL2 1 dataset
Motif DE_72h DE_72h-GRHL2_MA1105.3 8 bp overlap
GSX1 1 dataset
Motif DE_60h DE_60h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_60h DE_60h-GSX2_MA0893.3 7 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 320 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 227 bp overlap
HNF4A 1 dataset
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
HOXA1 1 dataset
Motif DE_60h DE_60h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_60h DE_60h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_60h DE_60h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_60h DE_60h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_60h DE_60h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_60h DE_60h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_60h DE_60h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_60h DE_60h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_60h DE_60h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_60h DE_60h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_60h DE_60h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_60h DE_60h-HOXC8_MA1505.2 6 bp overlap
HOXD8 1 dataset
Motif DE_60h DE_60h-HOXD8_MA0910.3 7 bp overlap
HSF1 1 dataset
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 251 bp overlap
Hnf1A 1 dataset
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
IRF1 1 dataset
ChIP HAEC_IL1b_4h GSE89970.IRF1.HAEC_IL1b_4h 139 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 181 bp overlap
ISX 1 dataset
Motif DE_60h DE_60h-ISX_MA0654.2 6 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 267 bp overlap
LHX5 1 dataset
Motif DE_60h DE_60h-LHX5_MA1519.2 7 bp overlap
LIN54 1 dataset
Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap
Lef1 1 dataset
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
Lhx4 1 dataset
Motif DE_60h DE_60h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_60h DE_60h-Lhx8_MA0705.2 6 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEOX1 1 dataset
Motif DE_60h DE_60h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_60h DE_60h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_60h DE_60h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_60h DE_60h-MNX1_MA0707.3 6 bp overlap
MYB 1 dataset
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 196 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 147 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 532 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 313 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 219 bp overlap
ChIP hESC GSE18292.NANOG.hESC 114 bp overlap
NKX6-2 1 dataset
Motif DE_60h DE_60h-NKX6-2_MA0675.2 6 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 125 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 141 bp overlap
PDX1 1 dataset
Motif DE_60h DE_60h-PDX1_MA0132.3 6 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 451 bp overlap
POU2F2 1 dataset
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
POU3F2 1 dataset
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
POU6F1 1 dataset
Motif DE_60h DE_60h-POU6F1_MA0628.2 6 bp overlap
PRRX1 1 dataset
Motif DE_60h DE_60h-PRRX1_MA0716.2 6 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 153 bp overlap
RAX2 1 dataset
Motif DE_60h DE_60h-RAX2_MA0717.2 6 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 324 bp overlap
SHOX 1 dataset
Motif DE_60h DE_60h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 311 bp overlap
SMARCA4 7 datasets
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 244 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 232 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 140 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 396 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 106 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 272 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 263 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 200 bp overlap
SOX17_M 2 datasets
ChIP DE_D2 DED2-SOX17-M_Batch_II 296 bp overlap
ChIP DE_D2 DED2-SOX17-M_Batch_II 306 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 134 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 345 bp overlap
Shox2 1 dataset
Motif DE_60h DE_60h-Shox2_MA0720.2 6 bp overlap
TCF7 1 dataset
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 188 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 188 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 409 bp overlap
TLX2 1 dataset
Motif DE_60h DE_60h-TLX2_MA1577.2 6 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
UNCX 1 dataset
Motif DE_60h DE_60h-UNCX_MA0721.2 6 bp overlap
VAX2 1 dataset
Motif DE_60h DE_60h-VAX2_MA0723.3 6 bp overlap
ZNF213 1 dataset
Motif DE_72h DE_72h-ZNF213_MA2121.1 12 bp overlap
ZNF682 1 dataset
Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap
Zfp809 1 dataset
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap