chr1 : 76,230,892 76,231,281
389 bp 90 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:76,225,892 – 76,236,281
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 204 bp overlap
BRD4 1 dataset
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 149 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 219 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 175 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 297 bp overlap
ChIP H1 ENCFF126NLU 389 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 150 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 271 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 223 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 156 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 302 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 384 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 309 bp overlap
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 83 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 389 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 287 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 374 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 388 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 193 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 206 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 282 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 370 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 389 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 389 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 267 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 389 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 389 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 293 bp overlap
ChIP hESC GSE18292.NANOG.hESC 185 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 213 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 202 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 260 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 166 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 376 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 152 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 16 datasets
ChIP BG03 GSE21614.POU5F1.BG03 181 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 293 bp overlap
ChIP GM23338 ENCFF333SNB 222 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 389 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 389 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 389 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 325 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 389 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 323 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 381 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 389 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 389 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 389 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 328 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Pou5f1::Sox2 4 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SMAD2 4 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 311 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 374 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 308 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 389 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 302 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 372 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 272 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 378 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 389 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE21614.SMAD3.BG03 320 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 211 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 193 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 304 bp overlap
ChIP hESC_DIFF_D1 GSE75297.SMAD3.hESC_DIFF_D1 329 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 273 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 389 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 389 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 362 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 389 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 350 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 389 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 389 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 344 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 282 bp overlap
ChIP WTC11 ENCFF688PEU 389 bp overlap
SRF 1 dataset
Motif DE_12h DE_12h-SRF_MA0083.3 16 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 245 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 129 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 137 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 240 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 253 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 389 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 230 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 249 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 180 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 127 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 191 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 220 bp overlap
ChIP NT2/D1 ENCFF999MII 91 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 268 bp overlap
Yy1 2 datasets
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZFP42 2 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZNF114 2 datasets
ChIP GM23338 ENCFF631OSW 310 bp overlap
ChIP GM23338 ENCSR555KFE.ZNF114.GM23338 247 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF184 2 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 245 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 260 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 178 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 331 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap