chr2 : 236,160,792 236,161,258
466 bp 66 TFs 2 linked genes
This 466 bp open chromatin element is linked to GBX2-AS1 and GBX2 and is bound by 66 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GBX2-AS1 6.2 kb Proximal Proximity
GBX2 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:236,155,792 – 236,166,258
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 229 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 233 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 142 bp overlap
ATF2 2 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 83 bp overlap
ChIP HepG2 ENCFF955VER 118 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 78 bp overlap
ATF7 2 datasets
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 91 bp overlap
ChIP HepG2 ENCFF470FKK 109 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 271 bp overlap
BRD4 2 datasets
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 207 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 444 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 466 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 134 bp overlap
CHD4 2 datasets
ChIP SCMC GSE155861.CHD4.SCMC 314 bp overlap
ChIP keratinocyte_CTR GSE139685.CHD4.keratinocyte_CTR 167 bp overlap
CHD7 4 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 177 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 92 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 129 bp overlap
ChIP hiPSC_derived_lt-NES_AF22 GSE108506.CHD7.hiPSC_derived_lt-NES_AF22 466 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 239 bp overlap
CTCF 1 dataset
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 244 bp overlap
CUX1 1 dataset
ChIP Hep-G2 ENCSR049KIZ.CUX1.Hep-G2 55 bp overlap
DAXX 2 datasets
ChIP PC-3 GSE68647.DAXX.PC-3 67 bp overlap
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 169 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 266 bp overlap
EGR1 8 datasets
ChIP HCT116 ENCFF456NPQ 309 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 190 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 182 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 165 bp overlap
ChIP K562 ENCFF006PJY 176 bp overlap
ChIP K562 ENCFF113OPQ 76 bp overlap
ChIP K562 ENCFF895KGN 147 bp overlap
ChIP T-HESCs GSE141063.EGR1.T-HESCs 169 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 177 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 232 bp overlap
ESR1 2 datasets
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 108 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 217 bp overlap
EZH2 10 datasets
ChIP GM23338 ENCFF613YON 162 bp overlap
ChIP GM23338 ENCFF613YON 81 bp overlap
ChIP GM23338 ENCFF886DXX 261 bp overlap
ChIP H1 ENCFF232NZA 466 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 100 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 236 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 275 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 174 bp overlap
ChIP neural progenitor cell ENCFF018MKA 466 bp overlap
ChIP neural progenitor cell ENCFF472NFV 466 bp overlap
FOXA1 1 dataset
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 83 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 226 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 144 bp overlap
GLIS2 2 datasets
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 249 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 294 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 349 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 221 bp overlap
HMGA2 2 datasets
ChIP WTC11 ENCFF535JLP 206 bp overlap
ChIP WTC11 ENCFF535JLP 397 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 152 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 466 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 153 bp overlap
KLF9 2 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 94 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 74 bp overlap
MTA1 1 dataset
ChIP HepG2 ENCFF038CCB 369 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 466 bp overlap
NRF1 4 datasets
ChIP K-562 ENCSR837EYC.NRF1.K-562 163 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 117 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 157 bp overlap
ChIP K562 ENCFF130SGK 266 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 196 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 245 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF467WJF 219 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 439 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 234 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 451 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 415 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 82 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 269 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 466 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 346 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 466 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 307 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 213 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 466 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 321 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 466 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 200 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 284 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 169 bp overlap
SSRP1 1 dataset
ChIP HT-1080_CBL0100 GSE107595.SSRP1.HT-1080_CBL0100 251 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 167 bp overlap
SUZ12 7 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 405 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 244 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 118 bp overlap
ChIP H1 ENCFF881NFR 466 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 61 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 369 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 466 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 411 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 411 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 302 bp overlap
TP53 1 dataset
ChIP H9 GSE142050.TP53.H9 208 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 243 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 314 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 244 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 204 bp overlap
ZKSCAN8 4 datasets
ChIP HepG2 ENCFF555WYO 148 bp overlap
ChIP K-562 ENCSR448UKK.ZKSCAN8.K-562 63 bp overlap
ChIP K562 ENCFF387ETI 307 bp overlap
ChIP WTC11 ENCFF666HNJ 75 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 192 bp overlap
ZNF184 2 datasets
ChIP WTC11 ENCFF352POG 380 bp overlap
ChIP WTC11 ENCFF352POG 278 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 284 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 250 bp overlap