chr2 : 227,206,260 – 227,207,199

939 bp 92 TFs 0 linked genes

This 939 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

92 transcription factors

ATF2 1 dataset

Motif DE_24h DE_24h-ATF2_MA1632.2 10 bp overlap

ATF3 1 dataset

Motif DE_24h DE_24h-ATF3_MA0605.3 10 bp overlap

ATF7 1 dataset

Motif DE_24h DE_24h-ATF7_MA0834.2 10 bp overlap

BCL11A 1 dataset

ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 108 bp overlap

Bcl11B 1 dataset

Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap

CREB1 2 datasets

Motif DE_24h DE_24h-CREB1_MA0018.5 8 bp overlap

ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 261 bp overlap

CREM 1 dataset

Motif DE_24h DE_24h-CREM_MA0609.3 10 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF262VBH 294 bp overlap

ChIP BLaER1 ENCFF844FIP 50 bp overlap

Creb5 1 dataset

Motif DE_24h DE_24h-Creb5_MA0840.2 10 bp overlap

Crx 1 dataset

Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap

DMRTA2 2 datasets

Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap

Motif DE_24h DE_24h-DMRTA2_MA1478.2 6 bp overlap

ESR2 1 dataset

Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap

ETV2 1 dataset

Motif DE_24h DE_24h-ETV2_MA0762.2 9 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap

FIGLA 2 datasets

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap

FOS::JUN 1 dataset

Motif DE_24h DE_24h-FOSJUN_MA1126.2 10 bp overlap

FOSB::JUN 1 dataset

Motif DE_24h DE_24h-FOSBJUN_MA1127.1 11 bp overlap

FOSB::JUNB 1 dataset

Motif DE_24h DE_24h-FOSBJUNB_MA1136.1 10 bp overlap

FOSL1::JUN 1 dataset

Motif DE_24h DE_24h-FOSL1JUN_MA1129.1 10 bp overlap

FOSL2 1 dataset

Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap

FOSL2::JUN 1 dataset

Motif DE_24h DE_24h-FOSL2JUN_MA1131.2 10 bp overlap

FOSL2::JUNB 1 dataset

Motif DE_24h DE_24h-FOSL2JUNB_MA1139.2 10 bp overlap

FOSL2::JUND 1 dataset

Motif DE_24h DE_24h-FOSL2JUND_MA1145.2 10 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

GATA6 2 datasets

ChIP DE_D1 S41-DE-d1-GATA6-exp2 296 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 502 bp overlap

GLIS3 1 dataset

Motif DE_24h DE_24h-GLIS3_MA0737.1 14 bp overlap

GSC 1 dataset

Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap

HOXB4 1 dataset

Motif DE_24h DE_24h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_24h DE_24h-HOXC4_MA1504.2 6 bp overlap

HOXD3 1 dataset

Motif DE_24h DE_24h-HOXD3_MA0912.2 8 bp overlap

HOXD4 1 dataset

Motif DE_24h DE_24h-HOXD4_MA1507.2 6 bp overlap

Hand1 2 datasets

Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap

Motif DE_24h DE_24h-Hand1_MA2123.1 9 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

IKZF2 2 datasets

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap

INSM1 2 datasets

Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap

Motif DE_24h DE_24h-INSM1_MA0155.1 12 bp overlap

JDP2 1 dataset

Motif DE_24h DE_24h-JDP2_MA0656.2 10 bp overlap

JUN 9 datasets

Motif DE_24h DE_24h-JUN_MA0488.2 10 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 571 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 377 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 939 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 533 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 427 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 467 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 615 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 742 bp overlap

JUN::JUNB 1 dataset

Motif DE_24h DE_24h-JUNJUNB_MA1133.2 11 bp overlap

JUNB 1 dataset

Motif DE_24h DE_24h-JUNB_MA1140.3 11 bp overlap

JUND 1 dataset

Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap

KDM4C 1 dataset

ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 173 bp overlap

MAFF 3 datasets

Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap

Motif DE_24h DE_24h-MAFF_MA0495.4 11 bp overlap

MEIS1 3 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap

MGA 2 datasets

Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap

Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap

MYOD1 1 dataset

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap

NR2C1 1 dataset

Motif DE_24h DE_24h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_24h DE_24h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

Motif DE_24h DE_24h-NR2F1_MA0017.3 12 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BHF.NR3C1.A-549 196 bp overlap

Nr1H2 1 dataset

Motif DE_24h DE_24h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_24h DE_24h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_24h DE_24h-Nr1h3_MA2337.1 6 bp overlap

OTX1 1 dataset

Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap

PAX5 1 dataset

Motif DE_24h DE_24h-PAX5_MA0014.4 8 bp overlap

PITX1 1 dataset

Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 354 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 495 bp overlap

POU6F1 1 dataset

Motif DE_24h DE_24h-POU6F1_MA1549.2 7 bp overlap

POU6F2 1 dataset

Motif DE_24h DE_24h-POU6F2_MA0793.2 9 bp overlap

RHOXF1 1 dataset

Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap

RORA 1 dataset

Motif DE_24h DE_24h-RORA_MA0071.1 10 bp overlap

RORB 1 dataset

Motif DE_24h DE_24h-RORB_MA1150.2 10 bp overlap

RUNX2 1 dataset

Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap

RUNX3 1 dataset

Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap

RXRG 1 dataset

Motif DE_24h DE_24h-RXRG_MA1556.1 14 bp overlap

Runx1 1 dataset

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

SMAD2 2 datasets

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 349 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 638 bp overlap

SMARCE1 1 dataset

ChIP HMLE-Twist-ER_125nM_4OHT GSE96933.SMARCE1.HMLE-Twist-ER_125nM_4OHT 185 bp overlap

SNAI2 2 datasets

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 211 bp overlap

SOX2 1 dataset

ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 130 bp overlap

SPIC 1 dataset

Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap

TBR1 2 datasets

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap

TBX1 2 datasets

Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap

Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap

TBX15 2 datasets

Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap

Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap

TBX2 2 datasets

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap

TBX4 2 datasets

Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap

Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap

TBX5 2 datasets

Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap

Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap

TP63 2 datasets

Motif DE_12h DE_12h-TP63_MA0525.2 18 bp overlap

Motif DE_24h DE_24h-TP63_MA0525.2 18 bp overlap

ZBTB24 1 dataset

Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap

ZBTB26 1 dataset

Motif DE_24h DE_24h-ZBTB26_MA1579.2 8 bp overlap

ZEB1 2 datasets

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap

ZFP64 1 dataset

ChIP HEK293 GSE76494.ZFP64.HEK293 153 bp overlap

ZNF189 1 dataset

Motif DE_24h DE_24h-ZNF189_MA1725.2 9 bp overlap

ZNF684 1 dataset

Motif DE_24h DE_24h-ZNF684_MA1600.2 14 bp overlap

ZSCAN31 1 dataset

Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap

Zfx 1 dataset

Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap