chr2 : 209,458,145 209,458,373
228 bp 79 TFs 0 linked genes
This 228 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:209,453,145 – 209,463,373
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
AR 23 datasets
ChIP LNCaP GSE110655.AR.LNCaP 181 bp overlap
ChIP LNCaP GSE117430.AR.LNCaP 89 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 106 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 135 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 228 bp overlap
ChIP LNCaP_DHT GSE83860.AR.LNCaP_DHT 121 bp overlap
ChIP LNCaP_DHT_Bag-1L-CMut GSE89938.AR.LNCaP_DHT_Bag-1L-CMut 103 bp overlap
ChIP LNCaP_DHT_GSK4H GSE114266.AR.LNCaP_DHT_GSK4H 144 bp overlap
ChIP LNCaP_DHT_TNFA GSE83860.AR.LNCaP_DHT_TNFA 107 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 155 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 130 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 85 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-Y GSE114732.AR.LNCaP_androgen-Y_hypoxia-Y 60 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 128 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 139 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 200 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 121 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 228 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 51 bp overlap
ChIP prostate GSE65478.AR.prostate 143 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 66 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 228 bp overlap
ChIP prostate_P29_T GSE130408.AR.prostate_P29_T 144 bp overlap
ARID1A 1 dataset
ChIP LNCaP_r1881 GSE94682.ARID1A.LNCaP_r1881 67 bp overlap
BRD4 2 datasets
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 128 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 133 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 228 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 228 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 167 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 50 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 228 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 228 bp overlap
E2F6 1 dataset
Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap
E2F7 1 dataset
Motif ES_0h ES_0h-E2F7_MA0758.1 14 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 228 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 191 bp overlap
ESR1 7 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 213 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 169 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 210 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 93 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 228 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 228 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 228 bp overlap
FOSL2 2 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 228 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 194 bp overlap
FOXA1 1 dataset
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 82 bp overlap
FOXB1 1 dataset
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXM1 2 datasets
ChIP Ishikawa ENCFF578VDD 228 bp overlap
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 178 bp overlap
Foxl2 1 dataset
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 228 bp overlap
HOXB13 11 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 130 bp overlap
ChIP LNCaP GSE96652.HOXB13.LNCaP 136 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 65 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 190 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 192 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 98 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 185 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 104 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 125 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 139 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 69 bp overlap
Hand1 1 dataset
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 195 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 217 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 228 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 228 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 135 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 228 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 193 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 55 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 219 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 228 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 149 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 228 bp overlap
ChIP SK-N-SH ENCFF965AKM 223 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 143 bp overlap
NFKB1 1 dataset
Motif ES_0h ES_0h-NFKB1_MA0105.4 13 bp overlap
NFKB2 1 dataset
Motif ES_0h ES_0h-NFKB2_MA0778.2 11 bp overlap
NR3C1 2 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 150 bp overlap
ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 132 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 3 datasets
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 228 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 89 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 216 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 222 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 228 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 194 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 166 bp overlap
RELA 3 datasets
ChIP LNCaP_DHT_TNFA GSE83860.RELA.LNCaP_DHT_TNFA 121 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 105 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 131 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 101 bp overlap
SCRT1 3 datasets
ChIP HEK293 ENCFF513YVP 228 bp overlap
ChIP HEK293 ENCFF513YVP 197 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 228 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 228 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 228 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 228 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 228 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMARCA2 6 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 228 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 228 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 224 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 228 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 228 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 228 bp overlap
SMARCA4 9 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 228 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 153 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 228 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 228 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 172 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 185 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 110 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 228 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 228 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 228 bp overlap
SMARCC1 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 187 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 222 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 228 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 75 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH ENCFF449PID 228 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 219 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 110 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SS18 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 228 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 213 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 228 bp overlap
TCF12 3 datasets
ChIP Ishikawa ENCFF467DDW 228 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 205 bp overlap
ChIP SK-N-SH ENCFF147AHB 228 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 153 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 140 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 218 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 212 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 101 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 228 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 133 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 133 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 228 bp overlap
ZFP14 1 dataset
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 163 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF418 1 dataset
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF680 1 dataset
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap