chr2 : 149,082,731 – 149,083,232

501 bp 86 TFs 0 linked genes

This 501 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

86 transcription factors

AFF4 1 dataset

ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 187 bp overlap

ASCL1 3 datasets

ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 114 bp overlap

ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 131 bp overlap

ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 251 bp overlap

ASXL3 2 datasets

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 458 bp overlap

ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 244 bp overlap

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

BRD4 4 datasets

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 443 bp overlap

ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 318 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 487 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 501 bp overlap

CASZ1 2 datasets

ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 439 bp overlap

ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 225 bp overlap

CHD2 1 dataset

ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 171 bp overlap

CHD7 1 dataset

ChIP H1 ENCFF126NLU 212 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 221 bp overlap

CTCF 5 datasets

ChIP HEK293 ENCFF821TIC 242 bp overlap

ChIP HEK293 ENCFF821TIC 431 bp overlap

ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 221 bp overlap

ChIP erythroid GSE67783.CTCF.erythroid 169 bp overlap

ChIP keratinocyte GSE154221.CTCF.keratinocyte 159 bp overlap

ETV2 1 dataset

Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

EZH2 2 datasets

ChIP DND41 ENCSR000ASW.EZH2.DND41 296 bp overlap

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 335 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 90 bp overlap

GATA2 2 datasets

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 207 bp overlap

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 215 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 266 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HDAC1 1 dataset

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 236 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 211 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 346 bp overlap

HNRNPH1 2 datasets

ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 205 bp overlap

ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 188 bp overlap

Hic1 1 dataset

Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

KLF1 3 datasets

Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap

ChIP HEK293 ENCSR859BMR.KLF1.HEK293 315 bp overlap

ChIP HEK293 GSE76494.KLF1.HEK293 142 bp overlap

KLF2 1 dataset

Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap

KLF3 1 dataset

ChIP keratinocyte GSE140991.KLF3.keratinocyte 439 bp overlap

KLF4 2 datasets

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 181 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

KLF6 1 dataset

Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap

KLF9 2 datasets

Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap

ChIP GBM1A GSE62211.KLF9.GBM1A 97 bp overlap

MAX 6 datasets

ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 218 bp overlap

ChIP NCI-H128 GSE41105.MAX.NCI-H128 305 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 426 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 417 bp overlap

ChIP SK-N-SH ENCFF285LXR 411 bp overlap

ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 156 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 186 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MYC 3 datasets

ChIP NB69 GSE138295.MYC.NB69 276 bp overlap

ChIP NCI-H128 GSE41105.MYC.NCI-H128 280 bp overlap

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 344 bp overlap

MYCN 2 datasets

ChIP CHP-134 GSE129588.MYCN.CHP-134 232 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 342 bp overlap

MYOD1 5 datasets

ChIP RD GSE137168.MYOD1.RD 203 bp overlap

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 213 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 445 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 337 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap

NANOG 1 dataset

ChIP WA09 GSE105028.NANOG.WA09 254 bp overlap

NELFE 1 dataset

ChIP HeLa GSE125534.NELFE.HeLa 294 bp overlap

NHLH2 1 dataset

Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap

NKX2-1 1 dataset

ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 352 bp overlap

NR3C1 1 dataset

ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 152 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 186 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 180 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 268 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 408 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 236 bp overlap

PRDM1 1 dataset

Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap

PROX1 1 dataset

ChIP SW480 GSE60390.PROX1.SW480 111 bp overlap

Prdm5 1 dataset

Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap

RAD21 2 datasets

ChIP RH4 GSE83726.RAD21.RH4 283 bp overlap

ChIP neural ENCSR198ZYJ.RAD21.neural 56 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 283 bp overlap

REST 1 dataset

ChIP SK-N-SH ENCFF861MKH 245 bp overlap

SIX1 1 dataset

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

SIX2 4 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

ChIP HEK GSE73865.SIX2.HEK 324 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 246 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 262 bp overlap

SIX5 1 dataset

ChIP K562 ENCFF472MWE 251 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 203 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 260 bp overlap

SMC1A 1 dataset

ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 241 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 244 bp overlap

ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 241 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 501 bp overlap

Six4 1 dataset

Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap

TARDBP 1 dataset

ChIP K-562 GSE120104.TARDBP.K-562 183 bp overlap

TCF12 2 datasets

ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 217 bp overlap

ChIP SK-N-SH ENCFF147AHB 391 bp overlap

TCF4 1 dataset

Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap

TEAD4 2 datasets

ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 107 bp overlap

ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 501 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 186 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 501 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 482 bp overlap

TP53 1 dataset

ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 236 bp overlap

TWIST1 4 datasets

ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 298 bp overlap

ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 304 bp overlap

ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 364 bp overlap

ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 298 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

Tfcp2l1 1 dataset

Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap

YY1 2 datasets

ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 121 bp overlap

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 278 bp overlap

YY1AP1 2 datasets

ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 382 bp overlap

ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 333 bp overlap

ZBTB42 1 dataset

ChIP HEK293 GSE76494.ZBTB42.HEK293 263 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZFP64 1 dataset

ChIP HEK293 GSE76494.ZFP64.HEK293 162 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 471 bp overlap

ZNF140 1 dataset

Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap

ZNF189 1 dataset

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

ZNF341 1 dataset

Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZNF750 1 dataset

ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 366 bp overlap

ZNF75D 1 dataset

Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap

ZNF766 1 dataset

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap