chr1 : 39,898,205 39,898,458
253 bp 60 TFs 1 linked gene
This 253 bp open chromatin element is linked to MYCL and is bound by 60 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MYCL 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:39,893,205 – 39,903,458
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 253 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 253 bp overlap
ChIP H1 ENCFF399KAM 126 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 253 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 156 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 253 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 211 bp overlap
BRD4 3 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 197 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 253 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 253 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 253 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 253 bp overlap
CTNNB1 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 223 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 215 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
ERG 2 datasets
ChIP aortic-endothelial-cell_D21 GSE139377.ERG.aortic-endothelial-cell_D21 108 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 82 bp overlap
ETS1 3 datasets
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 171 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 59 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 150 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 253 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 253 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 253 bp overlap
ChIP neural progenitor cell ENCFF018MKA 253 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 242 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 215 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 165 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 244 bp overlap
ChIP DE DE-GATA6-2 206 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 253 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 253 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 253 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 253 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 253 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 253 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 113 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 205 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 253 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 253 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 253 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 55 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 253 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 77 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 190 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 117 bp overlap
MEIS1 1 dataset
ChIP HepG2 ENCFF706DID 129 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 50 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 224 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 253 bp overlap
MYC 1 dataset
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 161 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 253 bp overlap
ChIP H1 ENCFF747ZPQ 201 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 253 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 253 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 223 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 253 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 253 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 253 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 154 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 253 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 253 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 143 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 253 bp overlap
POU5F1 7 datasets
ChIP GM23338 ENCFF333SNB 246 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 253 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 252 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 253 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 195 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 120 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 253 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 224 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 221 bp overlap
RARA 1 dataset
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 222 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 199 bp overlap
RELA 11 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 93 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 97 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 97 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 123 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 136 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 67 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 145 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 133 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 206 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 149 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 122 bp overlap
REST 1 dataset
ChIP WA01 ENCSR000BHM.REST.WA01 106 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 253 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 253 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 253 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 253 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 217 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 253 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 231 bp overlap
SMARCA4 6 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 232 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 211 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 253 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 217 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 253 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 253 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 253 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 253 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 253 bp overlap
SOX2 12 datasets
ChIP H9 GSE46837.SOX2.H9 231 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 253 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 253 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 253 bp overlap
ChIP NPC GSE122631.SOX2.NPC 214 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 153 bp overlap
ChIP hESC GSE69479.SOX2.hESC 155 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 244 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 204 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 186 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 177 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 236 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 253 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 246 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 253 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 147 bp overlap
SUZ12 1 dataset
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 253 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 143 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 203 bp overlap
TARDBP 1 dataset
ChIP K-562 GSE120104.TARDBP.K-562 201 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 184 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 253 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 223 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 233 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 220 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 185 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 95 bp overlap
ZNF148 3 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 253 bp overlap
ChIP K-562 GSE121133.ZNF148.K-562 253 bp overlap
ChIP K562 ENCFF352SDL 253 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 220 bp overlap
ZNF281 2 datasets
ChIP K562 ENCFF594VNM 224 bp overlap
ChIP K562 ENCFF594VNM 213 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 203 bp overlap