chr20 : 62,480,300 – 62,480,522
222 bp 71 TFs 1 linked gene
This 222 bp open chromatin element is linked to GATA5 and is bound by 71 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GATA5 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:62,475,300 – 62,485,522
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
BCL11A 12 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 73 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 143 bp overlap
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 144 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 116 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 141 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 145 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 170 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 117 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 159 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 144 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 135 bp overlap
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 183 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 208 bp overlap
BRD4 3 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 179 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 192 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 222 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 222 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 84 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 90 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 134 bp overlap
EBF1 2 datasets
ChIP MUTUL GSE75503.EBF1.MUTUL 222 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 222 bp overlap
EGR1 2 datasets
ChIP A-375 GSE116190.EGR1.A-375 116 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 117 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 167 bp overlap
ERG 1 dataset
ChIP SEM GSE117864.ERG.SEM 153 bp overlap
ESR1 1 dataset
ChIP T-47D-B_E2 GSE80358.ESR1.T-47D-B_E2 50 bp overlap
ETS1 3 datasets
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 222 bp overlap
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 132 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 222 bp overlap
GATA1 6 datasets
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 72 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 124 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 162 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 172 bp overlap
ChIP erythroblast ENCFF867JAR 137 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 222 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 204 bp overlap
ChIP DE DE-GATA4-2 222 bp overlap
ChIP foregut GSE117136.GATA4.foregut 222 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 222 bp overlap
GATA6 5 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 108 bp overlap
ChIP DE DE-GATA6-1 213 bp overlap
ChIP DE DE-GATA6-2 222 bp overlap
ChIP foregut GSE117136.GATA6.foregut 222 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 199 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 222 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 222 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 193 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 203 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 222 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 136 bp overlap
IKZF1 2 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 193 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 222 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 184 bp overlap
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 222 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 222 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 164 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 116 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 222 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 165 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 160 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 153 bp overlap
KLF5 1 dataset
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 176 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 115 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 222 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 102 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 161 bp overlap
NR3C1 1 dataset
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 222 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 159 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 222 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 196 bp overlap
POLR2A 2 datasets
ChIP erythroblast ENCFF498VMR 222 bp overlap
ChIP stomach ENCFF820WZN 222 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 76 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 88 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 61 bp overlap
RB1 1 dataset
ChIP K-562 ENCSR670JDQ.RB1.K-562 144 bp overlap
RBBP5 1 dataset
ChIP K-562 ENCSR000AQI.RBBP5.K-562 82 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 161 bp overlap
RNF2 1 dataset
ChIP WA01 ENCSR784VUY.RNF2.WA01 50 bp overlap
RUNX1 1 dataset
ChIP 697 GSE138031.RUNX1.697 154 bp overlap
SMAD1 1 dataset
ChIP CD34_ERYTH_BMP GSE29194.SMAD1.CD34_ERYTH_BMP 193 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 222 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 126 bp overlap
SMARCA4 1 dataset
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 189 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 222 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 178 bp overlap
SP2 2 datasets
ChIP HEK293 ENCSR807LQP.SP2.HEK293 188 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 94 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 222 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 147 bp overlap
STAT3 3 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 183 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 127 bp overlap
ChIP TMD8_DMSO GSE123398.STAT3.TMD8_DMSO 177 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 191 bp overlap
TAL1 3 datasets
ChIP CD34 GSE52924.TAL1.CD34 120 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 104 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 222 bp overlap
TBP 2 datasets
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 204 bp overlap
ChIP K-562 GSE55306.TBP.K-562 186 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 222 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 116 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 178 bp overlap
UBTF 2 datasets
ChIP K-562 ENCSR000EFZ.UBTF.K-562 193 bp overlap
ChIP K562 ENCFF174SPM 222 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 170 bp overlap
ChIP K562 ENCFF053XDV 222 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 222 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 95 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 147 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 111 bp overlap
ZBTB7A 3 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 222 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 143 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 75 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 203 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 141 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 127 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 222 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 150 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 190 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 114 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 222 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 164 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 150 bp overlap
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