chr2 : 13,523,695 13,523,824
129 bp 66 TFs 0 linked genes
This 129 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:13,518,695 – 13,528,824
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 110 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 129 bp overlap
ARNTL 2 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 129 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 129 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 129 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 129 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 129 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 129 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 129 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 113 bp overlap
BATF3 2 datasets
ChIP GM12878 GSE97661.BATF3.GM12878 129 bp overlap
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 129 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 129 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 129 bp overlap
BCL3 2 datasets
ChIP GM12878 ENCFF854PAY 129 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 129 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 129 bp overlap
BRD4 7 datasets
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 129 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 129 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 129 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 129 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 129 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 129 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 129 bp overlap
CDK8 1 dataset
ChIP MM1-S GSE43743.CDK8.MM1-S 129 bp overlap
CDK9 2 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 129 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 124 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 129 bp overlap
CREBBP 1 dataset
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 92 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 129 bp overlap
CTCF 3 datasets
ChIP C4-2B ENCFF821XVN 129 bp overlap
ChIP C4-2B ENCFF821XVN 129 bp overlap
ChIP endodermal cell ENCFF471YCZ 103 bp overlap
DPF2 3 datasets
ChIP GM12878 ENCFF681AJV 64 bp overlap
ChIP GM12878 ENCFF681AJV 129 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 98 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 129 bp overlap
ChIP GM12878 ENCFF813OXE 107 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 129 bp overlap
ChIP LCL GSE75503.EBF1.LCL 129 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 129 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF242HCG 129 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 129 bp overlap
ETV6 2 datasets
ChIP GM12878 ENCFF105ZMI 118 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 129 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 129 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 97 bp overlap
ChIP prostate_2484 GSE130408.FOXA1.prostate_2484 55 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 78 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 129 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 129 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 62 bp overlap
HOXB13 3 datasets
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 129 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 93 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 129 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF824TGK 88 bp overlap
IRF4 2 datasets
ChIP GM12878 ENCFF769ZDL 129 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 129 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 129 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 129 bp overlap
KLF4 2 datasets
ChIP HAP1 GSE130417.KLF4.HAP1 94 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 129 bp overlap
MAF 1 dataset
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 129 bp overlap
MED1 5 datasets
ChIP GM12878 GSE93080.MED1.GM12878 129 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 129 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 129 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 129 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 129 bp overlap
MEF2A 1 dataset
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 129 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 129 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 91 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 129 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 114 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 129 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 129 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 129 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 129 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_TA GSE24518.NR3C1.HeLa-B2_TA 84 bp overlap
PAX5 4 datasets
ChIP GM12878 ENCFF482PUW 129 bp overlap
ChIP GM12878 ENCFF503GOV 129 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 129 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 129 bp overlap
PKNOX1 1 dataset
ChIP GM12878 ENCFF589FCY 56 bp overlap
PML 1 dataset
ChIP GM12878 ENCSR000BQM.PML.GM12878 129 bp overlap
POLR2A 1 dataset
ChIP GM19099 ENCFF726IBN 85 bp overlap
RAD21 6 datasets
ChIP GM12878 ENCFF101UQZ 129 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 129 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 129 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 129 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 129 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 100 bp overlap
RBPJ 3 datasets
ChIP LCL GSE75503.RBPJ.LCL 129 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 129 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 129 bp overlap
RELA 2 datasets
ChIP GM12878 ENCSR000EAG.RELA.GM12878 129 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 129 bp overlap
RELB 4 datasets
ChIP GM12878 ENCFF217ADF 124 bp overlap
ChIP GM12878 ENCFF217ADF 129 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 129 bp overlap
ChIP L1236 GSE63736.RELB.L1236 129 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 129 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 121 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 129 bp overlap
STAT5A 1 dataset
ChIP GM12878 ENCFF267JUM 129 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 129 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCFF506WWB 129 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 129 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCFF919OMX 129 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 68 bp overlap
TSC22D4 1 dataset
ChIP GM12878 GSE97661.TSC22D4.GM12878 129 bp overlap
ZBED1 2 datasets
ChIP GM12878 ENCFF007OSW 129 bp overlap
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 129 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap