chr18 : 43,627,837 43,628,405
568 bp 70 TFs 0 linked genes
This 568 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:43,622,837 – 43,633,405
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ASCL1 4 datasets
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 243 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 180 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 244 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 279 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 568 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 568 bp overlap
ATF2 1 dataset
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 289 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 568 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 568 bp overlap
BRD4 4 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 568 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 568 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 568 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 568 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 206 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 130 bp overlap
CTCF 1 dataset
ChIP erythroid GSE67783.CTCF.erythroid 162 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 215 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 391 bp overlap
ESR1 8 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 355 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 228 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 191 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 487 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 530 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 199 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 420 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 343 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 509 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 538 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 446 bp overlap
FLI1 5 datasets
ChIP A-673 GSE99959.FLI1.A-673 437 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 419 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 341 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 253 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 389 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 308 bp overlap
ChIP DE DE-FOXA2-2 310 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 169 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 390 bp overlap
ChIP DE DE-GATA4-2 433 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 272 bp overlap
ChIP foregut GSE117136.GATA4.foregut 286 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 350 bp overlap
ChIP DE DE-GATA6-2 270 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 267 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 488 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 506 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 431 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 194 bp overlap
HNF4A 1 dataset
ChIP GP5D GSE51234.HNF4A.GP5D 327 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 418 bp overlap
KLF14 1 dataset
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 289 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 173 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 281 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 111 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 434 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 69 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 356 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 257 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 158 bp overlap
POLR2A 3 datasets
ChIP SK-N-MC ENCFF088IVG 368 bp overlap
ChIP neural cell ENCFF604SPB 385 bp overlap
ChIP neural cell ENCFF604SPB 311 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 302 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 136 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 257 bp overlap
RAD21 2 datasets
ChIP neural ENCSR198ZYJ.RAD21.neural 558 bp overlap
ChIP neural cell ENCFF564MOT 464 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 226 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 294 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 88 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 356 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 418 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 555 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 433 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 250 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 213 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 568 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 194 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 292 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 265 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 421 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 221 bp overlap
ChIP glioma_stem GSE67282.SOX2.glioma_stem 192 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 516 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 532 bp overlap
TAF1 1 dataset
ChIP PFSK-1 ENCFF982LZL 104 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 331 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF582MWI 568 bp overlap
ChIP HEK293 ENCFF582MWI 442 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 302 bp overlap
YY1 2 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 303 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 91 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 301 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 388 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 372 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 215 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 501 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 383 bp overlap
ZNF549 2 datasets
ChIP HEK293 ENCSR185QFX.ZNF549.HEK293 330 bp overlap
ChIP HEK293 GSE76494.ZNF549.HEK293 157 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 194 bp overlap
ZNF76 1 dataset
ChIP HEK293 GSE76494.ZNF76.HEK293 152 bp overlap