chr17 : 1,031,608 1,032,193
585 bp 54 TFs 7 linked genes
This 585 bp open chromatin element is linked to 7 target genes and is bound by 54 transcription factors.
Linked Genes
7 genes
Gene Expression Dist. to TSS Distance Link type
TIMM22 34.8 kb Distal Multiome
NXN 52.1 kb Distal Multiome
ABR 148.1 kb Distal Multiome
MRM3 249.5 kb Distal Multiome
GLOD4 249.6 kb Distal Multiome
GEMIN4 279.7 kb Distal Multiome
TLCD3A 299.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:1,026,608 – 1,037,193
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 213 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 194 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 250 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 585 bp overlap
BRD2 1 dataset
ChIP foreskin_NHM1-5 GSE94488.BRD2.foreskin_NHM1-5 230 bp overlap
BRD4 6 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 202 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 244 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 204 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 189 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 257 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 279 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 242 bp overlap
CTCF 3 datasets
ChIP artery_tibial ENCSR699BEK.CTCF.artery_tibial 171 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 283 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 160 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 230 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 182 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 241 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 119 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 53 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 581 bp overlap
FEZF2 1 dataset
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 284 bp overlap
HNRNPK 6 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 585 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 266 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 235 bp overlap
ChIP HepG2 ENCFF493GNS 417 bp overlap
ChIP HepG2 ENCFF826MXP 426 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 366 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 375 bp overlap
KDM4A 7 datasets
ChIP H1 ENCFF078LED 121 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 197 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 269 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 201 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 168 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 205 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 232 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 246 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 102 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 103 bp overlap
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 149 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 349 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 305 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 263 bp overlap
PCBP1 4 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 241 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 183 bp overlap
ChIP K-562 ENCSR052PTN.PCBP1.K-562 194 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 194 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 585 bp overlap
PML 1 dataset
ChIP fibroblast GSE137084.PML.fibroblast 120 bp overlap
POLR2A 4 datasets
ChIP esophagus muscularis mucosa ENCFF432ZCY 363 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 277 bp overlap
ChIP gastroesophageal sphincter ENCFF043KAM 99 bp overlap
ChIP spleen ENCFF706IUS 282 bp overlap
POU5F1 3 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 76 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 585 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 163 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 585 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 153 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 218 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 585 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 564 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 170 bp overlap
SIRT6 2 datasets
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap
SMC1 2 datasets
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 179 bp overlap
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 134 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SREBP2 1 dataset
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 585 bp overlap
SUZ12 3 datasets
ChIP hiPSC GSE124903.SUZ12.hiPSC 212 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 114 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 232 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 88 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 585 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 509 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 516 bp overlap
TRIM25 2 datasets
ChIP BT-549 GSE79588.TRIM25.BT-549 190 bp overlap
ChIP BT-549 GSE79588.TRIM25.BT-549 247 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 186 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 560 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 368 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 478 bp overlap
ZNF213 1 dataset
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
ZNF263 3 datasets
ChIP K-562 ENCSR000EWN.ZNF263.K-562 219 bp overlap
ChIP K562 ENCFF640RNA 232 bp overlap
ChIP WTC11 ENCFF893RTM 165 bp overlap
ZNF460 1 dataset
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap