chr16 : 54,291,618 54,292,104
486 bp 56 TFs 2 linked genes
This 486 bp open chromatin element is linked to IRX3 and ENSG00000283689 and is bound by 56 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
IRX3 4.8 kb Proximal Proximity
ENSG00000283689 6.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:54,286,618 – 54,297,104
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 168 bp overlap
AGO1 1 dataset
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 72 bp overlap
AGO2 1 dataset
ChIP HepG2 ENCFF252VFI 145 bp overlap
AR 1 dataset
ChIP LNCaP_DHT GSE92347.AR.LNCaP_DHT 174 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 409 bp overlap
BRD4 2 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 305 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 188 bp overlap
CTCF 1 dataset
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 103 bp overlap
ESR1 1 dataset
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 253 bp overlap
EZH2 11 datasets
ChIP GM23338 ENCFF613YON 63 bp overlap
ChIP H1 ENCFF232NZA 486 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 254 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 235 bp overlap
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 137 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 76 bp overlap
ChIP astrocyte ENCFF365JTP 153 bp overlap
ChIP hepatocyte ENCFF552DZB 51 bp overlap
ChIP neural cell ENCFF610EPB 206 bp overlap
ChIP neural progenitor cell ENCFF018MKA 253 bp overlap
ChIP neural progenitor cell ENCFF472NFV 453 bp overlap
FOXA1 1 dataset
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 101 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 112 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 61 bp overlap
ChIP HepG2 ENCFF570ABM 129 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 334 bp overlap
GFI1B 1 dataset
ChIP SET-2 GSE121424.GFI1B.SET-2 66 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 256 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 60 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 99 bp overlap
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 208 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 187 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 235 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 123 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 134 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 177 bp overlap
MED1 2 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 97 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 54 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 208 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 64 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 164 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 107 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 152 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 119 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 149 bp overlap
NRL 1 dataset
ChIP HepG2 ENCFF528PUT 301 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 338 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 92 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 146 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 227 bp overlap
RAD21 1 dataset
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 299 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 251 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 224 bp overlap
RNF2 1 dataset
ChIP HUES-64 GSE104059.RNF2.HUES-64 345 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 130 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 64 bp overlap
RXRA 1 dataset
ChIP HepG2 ENCFF763IEA 96 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 239 bp overlap
SIX1 2 datasets
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF587VYG 186 bp overlap
SMARCA4 2 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 336 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 435 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 270 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 106 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 53 bp overlap
SS18 2 datasets
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 350 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 154 bp overlap
STAT3 2 datasets
ChIP FaDu_DMSO GSE78212.STAT3.FaDu_DMSO 401 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 284 bp overlap
SUZ12 3 datasets
ChIP H1 ENCFF881NFR 486 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 117 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 267 bp overlap
TCF7 1 dataset
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 134 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 337 bp overlap
ZFP91 2 datasets
ChIP HepG2 ENCFF012CME 459 bp overlap
ChIP HepG2 ENCFF012CME 486 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 150 bp overlap
ZNF730 1 dataset
ChIP HEK293T GSE78099.ZNF730.HEK293T 367 bp overlap